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UBE2O (ubiquitin conjugating enzyme E2 O)

Identity

Alias (NCBI)E2-230K
HGNC (Hugo) UBE2O
HGNC Alias symbE2-230K
HGNC Previous nameubiquitin-conjugating enzyme E2O
LocusID (NCBI) 63893
Atlas_Id 46667
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 76389456 and ends at 76453152 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BSDC1 (1p35.1) / UBE2O (17q25.1)MAT2A (2p11.2) / UBE2O (17q25.1)UBE2O (17q25.1) / RNF213 (17q25.3)
UBE2O (17q25.1) / UBE2O (17q25.1)USP32 (17q23.1) / UBE2O (17q25.1)UBE2O 17q25.1 / RNF213 17q25.3
USP32 17q23.1 / UBE2O 17q25.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)UBE2O   29554
Cards
Entrez_Gene (NCBI)UBE2O    ubiquitin conjugating enzyme E2 O
AliasesE2-230K
GeneCards (Weizmann)UBE2O
Ensembl hg19 (Hinxton)ENSG00000175931 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175931 [Gene_View]  ENSG00000175931 [Sequence]  chr17:76389456-76453152 [Contig_View]  UBE2O [Vega]
ICGC DataPortalENSG00000175931
TCGA cBioPortalUBE2O
AceView (NCBI)UBE2O
Genatlas (Paris)UBE2O
SOURCE (Princeton)UBE2O
Genetics Home Reference (NIH)UBE2O
Genomic and cartography
GoldenPath hg38 (UCSC)UBE2O  -     chr17:76389456-76453152 -  17q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UBE2O  -     17q25.1   [Description]    (hg19-Feb_2009)
GoldenPathUBE2O - 17q25.1 [CytoView hg19]  UBE2O - 17q25.1 [CytoView hg38]
ImmunoBaseENSG00000175931
Genome Data Viewer NCBIUBE2O [Mapview hg19]  
OMIM617649   
Gene and transcription
Genbank (Entrez)AB051521 AK000926 AK022940 AK024657 AK025999
RefSeq transcript (Entrez)NM_022066
Consensus coding sequences : CCDS (NCBI)UBE2O
Gene ExpressionUBE2O [ NCBI-GEO ]   UBE2O [ EBI - ARRAY_EXPRESS ]   UBE2O [ SEEK ]   UBE2O [ MEM ]
Gene Expression Viewer (FireBrowse)UBE2O [ Firebrowse - Broad ]
GenevisibleExpression of UBE2O in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)63893
GTEX Portal (Tissue expression)UBE2O
Human Protein AtlasENSG00000175931-UBE2O [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UBE2O
Human Protein Atlas [tissue]ENSG00000175931-UBE2O [tissue]
HPRD10928
Protein Interaction databases
BioGRIDUBE2O
STRING (EMBL)UBE2O
ZODIACUBE2O
Ontologies - Pathways
Litterature
PubMed83 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXUBE2O
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:37:09 CEST 2021

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