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UBE2QL1 (ubiquitin conjugating enzyme E2 Q family like 1)

Identity

Alias_namesubiquitin-conjugating enzyme E2Q family-like 1
ubiquitin conjugating enzyme E2Q family-like 1
Alias_symbol (synonym)FLJ25076
Other alias-
HGNC (Hugo) UBE2QL1
LocusID (NCBI) 134111
Atlas_Id 54036
Location 5p15.31  [Link to chromosome band 5p15]
Location_base_pair Starts at 6448623 and ends at 6496721 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SLC25A3 (12q23.1) / UBE2QL1 (5p15.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UBE2QL1   37269
Cards
Entrez_Gene (NCBI)UBE2QL1  134111  ubiquitin conjugating enzyme E2 Q family like 1
Aliases
GeneCards (Weizmann)UBE2QL1
Ensembl hg19 (Hinxton)ENSG00000215218 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215218 [Gene_View]  chr5:6448623-6496721 [Contig_View]  UBE2QL1 [Vega]
ICGC DataPortalENSG00000215218
TCGA cBioPortalUBE2QL1
AceView (NCBI)UBE2QL1
Genatlas (Paris)UBE2QL1
WikiGenes134111
SOURCE (Princeton)UBE2QL1
Genetics Home Reference (NIH)UBE2QL1
Genomic and cartography
GoldenPath hg38 (UCSC)UBE2QL1  -     chr5:6448623-6496721 +  5p15.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UBE2QL1  -     5p15.31   [Description]    (hg19-Feb_2009)
EnsemblUBE2QL1 - 5p15.31 [CytoView hg19]  UBE2QL1 - 5p15.31 [CytoView hg38]
Mapping of homologs : NCBIUBE2QL1 [Mapview hg19]  UBE2QL1 [Mapview hg38]
OMIM615832   
Gene and transcription
Genbank (Entrez)AB188494 AK057805 AK096612 AK308577 BC127723
RefSeq transcript (Entrez)NM_001145161
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UBE2QL1
Cluster EST : UnigeneHs.731466 [ NCBI ]
CGAP (NCI)Hs.731466
Alternative Splicing GalleryENSG00000215218
Gene ExpressionUBE2QL1 [ NCBI-GEO ]   UBE2QL1 [ EBI - ARRAY_EXPRESS ]   UBE2QL1 [ SEEK ]   UBE2QL1 [ MEM ]
Gene Expression Viewer (FireBrowse)UBE2QL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)134111
GTEX Portal (Tissue expression)UBE2QL1
Protein : pattern, domain, 3D structure
UniProt/SwissProtA1L167   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA1L167  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA1L167
Splice isoforms : SwissVarA1L167
Catalytic activity : Enzyme2.3.2.23 [ Enzyme-Expasy ]   2.3.2.232.3.2.23 [ IntEnz-EBI ]   2.3.2.23 [ BRENDA ]   2.3.2.23 [ KEGG ]   
PhosPhoSitePlusA1L167
Domaine pattern : Prosite (Expaxy)UBIQUITIN_CONJUGAT_2 (PS50127)   
Domains : Interpro (EBI)UBQ-conjugat_E2    UBQ-conjugating_enzyme/RWD   
Domain families : Pfam (Sanger)UQ_con (PF00179)   
Domain families : Pfam (NCBI)pfam00179   
Conserved Domain (NCBI)UBE2QL1
DMDM Disease mutations134111
Blocks (Seattle)UBE2QL1
SuperfamilyA1L167
Human Protein AtlasENSG00000215218
Peptide AtlasA1L167
IPIIPI00740385   
Protein Interaction databases
DIP (DOE-UCLA)A1L167
IntAct (EBI)A1L167
FunCoupENSG00000215218
BioGRIDUBE2QL1
STRING (EMBL)UBE2QL1
ZODIACUBE2QL1
Ontologies - Pathways
QuickGOA1L167
Ontology : AmiGOprotein binding  ATP binding  nucleus  plasma membrane  protein ubiquitination  ubiquitin conjugating enzyme activity  
Ontology : EGO-EBIprotein binding  ATP binding  nucleus  plasma membrane  protein ubiquitination  ubiquitin conjugating enzyme activity  
Pathways : KEGGUbiquitin mediated proteolysis   
NDEx NetworkUBE2QL1
Atlas of Cancer Signalling NetworkUBE2QL1
Wikipedia pathwaysUBE2QL1
Orthology - Evolution
OrthoDB134111
GeneTree (enSembl)ENSG00000215218
Phylogenetic Trees/Animal Genes : TreeFamUBE2QL1
HOVERGENA1L167
HOGENOMA1L167
Homologs : HomoloGeneUBE2QL1
Homology/Alignments : Family Browser (UCSC)UBE2QL1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUBE2QL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UBE2QL1
dbVarUBE2QL1
ClinVarUBE2QL1
1000_GenomesUBE2QL1 
Exome Variant ServerUBE2QL1
ExAC (Exome Aggregation Consortium)UBE2QL1 (select the gene name)
Genetic variants : HAPMAP134111
Genomic Variants (DGV)UBE2QL1 [DGVbeta]
DECIPHERUBE2QL1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUBE2QL1 
Mutations
ICGC Data PortalUBE2QL1 
TCGA Data PortalUBE2QL1 
Broad Tumor PortalUBE2QL1
OASIS PortalUBE2QL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUBE2QL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUBE2QL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UBE2QL1
DgiDB (Drug Gene Interaction Database)UBE2QL1
DoCM (Curated mutations)UBE2QL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UBE2QL1 (select a term)
intoGenUBE2QL1
Cancer3DUBE2QL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615832   
Orphanet
MedgenUBE2QL1
Genetic Testing Registry UBE2QL1
NextProtA1L167 [Medical]
TSGene134111
GENETestsUBE2QL1
Target ValidationUBE2QL1
Huge Navigator UBE2QL1 [HugePedia]
snp3D : Map Gene to Disease134111
BioCentury BCIQUBE2QL1
ClinGenUBE2QL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD134111
Chemical/Pharm GKB GenePA165660602
Clinical trialUBE2QL1
Miscellaneous
canSAR (ICR)UBE2QL1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUBE2QL1
EVEXUBE2QL1
GoPubMedUBE2QL1
iHOPUBE2QL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 13:01:40 CEST 2017

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