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UBL7 (ubiquitin like 7)

Identity

Alias (NCBI)BMSC-UbP
TCBA1
HGNC (Hugo) UBL7
HGNC Alias symbBMSC-UbP
MGC14421
HGNC Alias namebone marrow stromal cell-derived ubiquitin-like
  ubiquitin-like protein SB132
HGNC Previous nameubiquitin-like 7 (bone marrow stromal cell-derived)
 ubiquitin-like 7
LocusID (NCBI) 84993
Atlas_Id 75432
Location 15q24.1  [Link to chromosome band 15q24]
Location_base_pair Starts at 74445977 and ends at 74461188 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MAPK9 (5q35.3) / UBL7 (15q24.1)UBL7 (15q24.1) / HSPA5 (9q33.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(15;21)(q24;q22) RUNX1/UBL7
t(15;21)(q24;q22) RUNX1/UBL7


External links

 

Nomenclature
HGNC (Hugo)UBL7   28221
Cards
Entrez_Gene (NCBI)UBL7    ubiquitin like 7
AliasesBMSC-UbP; TCBA1
GeneCards (Weizmann)UBL7
Ensembl hg19 (Hinxton)ENSG00000138629 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000138629 [Gene_View]  ENSG00000138629 [Sequence]  chr15:74445977-74461188 [Contig_View]  UBL7 [Vega]
ICGC DataPortalENSG00000138629
TCGA cBioPortalUBL7
AceView (NCBI)UBL7
Genatlas (Paris)UBL7
SOURCE (Princeton)UBL7
Genetics Home Reference (NIH)UBL7
Genomic and cartography
GoldenPath hg38 (UCSC)UBL7  -     chr15:74445977-74461188 -  15q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UBL7  -     15q24.1   [Description]    (hg19-Feb_2009)
GoldenPathUBL7 - 15q24.1 [CytoView hg19]  UBL7 - 15q24.1 [CytoView hg38]
ImmunoBaseENSG00000138629
Genome Data Viewer NCBIUBL7 [Mapview hg19]  
OMIM609748   
Gene and transcription
Genbank (Entrez)AY037166 BC007913 BC030055 BC033919 BG704085
RefSeq transcript (Entrez)NM_001286739 NM_001286740 NM_001286741 NM_001286742 NM_032907 NM_201265
Consensus coding sequences : CCDS (NCBI)UBL7
Gene ExpressionUBL7 [ NCBI-GEO ]   UBL7 [ EBI - ARRAY_EXPRESS ]   UBL7 [ SEEK ]   UBL7 [ MEM ]
Gene Expression Viewer (FireBrowse)UBL7 [ Firebrowse - Broad ]
GenevisibleExpression of UBL7 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84993
GTEX Portal (Tissue expression)UBL7
Human Protein AtlasENSG00000138629-UBL7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96S82   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96S82  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96S82
PhosPhoSitePlusQ96S82
Domaine pattern : Prosite (Expaxy)UBA (PS50030)    UBIQUITIN_2 (PS50053)   
Domains : Interpro (EBI)UBA    UBA-like_sf    Ubiquitin-like_dom    Ubiquitin-like_domsf   
Domain families : Pfam (Sanger)ubiquitin (PF00240)   
Domain families : Pfam (NCBI)pfam00240   
Domain families : Smart (EMBL)UBA (SM00165)  UBQ (SM00213)  
Conserved Domain (NCBI)UBL7
PDB (RSDB)2CWB    2DEN   
PDB Europe2CWB    2DEN   
PDB (PDBSum)2CWB    2DEN   
PDB (IMB)2CWB    2DEN   
Structural Biology KnowledgeBase2CWB    2DEN   
SCOP (Structural Classification of Proteins)2CWB    2DEN   
CATH (Classification of proteins structures)2CWB    2DEN   
SuperfamilyQ96S82
AlphaFold pdb e-kbQ96S82   
Human Protein Atlas [tissue]ENSG00000138629-UBL7 [tissue]
HPRD16556
Protein Interaction databases
DIP (DOE-UCLA)Q96S82
IntAct (EBI)Q96S82
BioGRIDUBL7
STRING (EMBL)UBL7
ZODIACUBL7
Ontologies - Pathways
QuickGOQ96S82
Ontology : AmiGOprotein binding  cytosol  ubiquitin-dependent protein catabolic process  polyubiquitin modification-dependent protein binding  
Ontology : EGO-EBIprotein binding  cytosol  ubiquitin-dependent protein catabolic process  polyubiquitin modification-dependent protein binding  
NDEx NetworkUBL7
Atlas of Cancer Signalling NetworkUBL7
Wikipedia pathwaysUBL7
Orthology - Evolution
OrthoDB84993
GeneTree (enSembl)ENSG00000138629
Phylogenetic Trees/Animal Genes : TreeFamUBL7
Homologs : HomoloGeneUBL7
Homology/Alignments : Family Browser (UCSC)UBL7
Gene fusions - Rearrangements
Fusion : QuiverUBL7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUBL7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UBL7
dbVarUBL7
ClinVarUBL7
MonarchUBL7
1000_GenomesUBL7 
Exome Variant ServerUBL7
GNOMAD BrowserENSG00000138629
Varsome BrowserUBL7
ACMGUBL7 variants
VarityQ96S82
Genomic Variants (DGV)UBL7 [DGVbeta]
DECIPHERUBL7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUBL7 
Mutations
ICGC Data PortalUBL7 
TCGA Data PortalUBL7 
Broad Tumor PortalUBL7
OASIS PortalUBL7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUBL7  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DUBL7
Mutations and Diseases : HGMDUBL7
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaUBL7
DgiDB (Drug Gene Interaction Database)UBL7
DoCM (Curated mutations)UBL7
CIViC (Clinical Interpretations of Variants in Cancer)UBL7
Cancer3DUBL7
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609748   
Orphanet
DisGeNETUBL7
MedgenUBL7
Genetic Testing Registry UBL7
NextProtQ96S82 [Medical]
GENETestsUBL7
Target ValidationUBL7
Huge Navigator UBL7 [HugePedia]
ClinGenUBL7
Clinical trials, drugs, therapy
MyCancerGenomeUBL7
Protein Interactions : CTDUBL7
Pharm GKB GenePA142670645
PharosQ96S82
Clinical trialUBL7
Miscellaneous
canSAR (ICR)UBL7
HarmonizomeUBL7
DataMed IndexUBL7
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXUBL7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:27:45 CEST 2021

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