Atlas of Genetics and Cytogenetics in Oncology and Haematology


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UBR5-AS1 (UBR5 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) UBR5-AS1
LocusID (NCBI) 101927221
Atlas_Id 67085
Location 8q22.3  [Link to chromosome band 8q22]
Location_base_pair Starts at 103251679 and ends at 103264402 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)UBR5-AS1   51661
Cards
Entrez_Gene (NCBI)UBR5-AS1  101927221  UBR5 antisense RNA 1
Aliases
GeneCards (Weizmann)UBR5-AS1
Ensembl hg19 (Hinxton)ENSG00000246263 [Gene_View]  chr8:103251679-103264402 [Contig_View]  UBR5-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000246263 [Gene_View]  chr8:103251679-103264402 [Contig_View]  UBR5-AS1 [Vega]
ICGC DataPortalENSG00000246263
TCGA cBioPortalUBR5-AS1
AceView (NCBI)UBR5-AS1
Genatlas (Paris)UBR5-AS1
WikiGenes101927221
SOURCE (Princeton)UBR5-AS1
Genetics Home Reference (NIH)UBR5-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)UBR5-AS1  -     chr8:103251679-103264402 +  8q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)UBR5-AS1  -     8q22.3   [Description]    (hg38-Dec_2013)
EnsemblUBR5-AS1 - 8q22.3 [CytoView hg19]  UBR5-AS1 - 8q22.3 [CytoView hg38]
Mapping of homologs : NCBIUBR5-AS1 [Mapview hg19]  UBR5-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095151 BQ082210 DA677213 HG501537 HG501538
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)UBR5-AS1
Cluster EST : UnigeneHs.628151 [ NCBI ]
CGAP (NCI)Hs.628151
Alternative Splicing GalleryENSG00000246263
Gene ExpressionUBR5-AS1 [ NCBI-GEO ]   UBR5-AS1 [ EBI - ARRAY_EXPRESS ]   UBR5-AS1 [ SEEK ]   UBR5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)UBR5-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927221
GTEX Portal (Tissue expression)UBR5-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UBR5-AS1
DMDM Disease mutations101927221
Blocks (Seattle)UBR5-AS1
Human Protein AtlasENSG00000246263
Protein Interaction databases
FunCoupENSG00000246263
BioGRIDUBR5-AS1
STRING (EMBL)UBR5-AS1
ZODIACUBR5-AS1
Ontologies - Pathways
Huge Navigator UBR5-AS1 [HugePedia]
snp3D : Map Gene to Disease101927221
BioCentury BCIQUBR5-AS1
ClinGenUBR5-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927221
Clinical trialUBR5-AS1
Miscellaneous
canSAR (ICR)UBR5-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUBR5-AS1
EVEXUBR5-AS1
GoPubMedUBR5-AS1
iHOPUBR5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:50:41 CET 2017

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