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UBXN10-AS1 (UBXN10 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) UBXN10-AS1
LocusID (NCBI) 101928017
Atlas_Id 75447
Location 1p36.12  [Link to chromosome band 1p36]
Location_base_pair Starts at 20184243 and ends at 20186486 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UBXN10-AS1   41141
Cards
Entrez_Gene (NCBI)UBXN10-AS1  101928017  UBXN10 antisense RNA 1
Aliases
GeneCards (Weizmann)UBXN10-AS1
Ensembl hg19 (Hinxton)ENSG00000225986 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225986 [Gene_View]  chr1:20184243-20186486 [Contig_View]  UBXN10-AS1 [Vega]
ICGC DataPortalENSG00000225986
TCGA cBioPortalUBXN10-AS1
AceView (NCBI)UBXN10-AS1
Genatlas (Paris)UBXN10-AS1
WikiGenes101928017
SOURCE (Princeton)UBXN10-AS1
Genetics Home Reference (NIH)UBXN10-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)UBXN10-AS1  -     chr1:20184243-20186486 -  1p36.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UBXN10-AS1  -     1p36.12   [Description]    (hg19-Feb_2009)
EnsemblUBXN10-AS1 - 1p36.12 [CytoView hg19]  UBXN10-AS1 - 1p36.12 [CytoView hg38]
Mapping of homologs : NCBIUBXN10-AS1 [Mapview hg19]  UBXN10-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA683341 AI651649 AW970795 BX106299
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UBXN10-AS1
Cluster EST : UnigeneHs.550803 [ NCBI ]
CGAP (NCI)Hs.550803
Alternative Splicing GalleryENSG00000225986
Gene ExpressionUBXN10-AS1 [ NCBI-GEO ]   UBXN10-AS1 [ EBI - ARRAY_EXPRESS ]   UBXN10-AS1 [ SEEK ]   UBXN10-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)UBXN10-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928017
GTEX Portal (Tissue expression)UBXN10-AS1
Human Protein AtlasENSG00000225986-UBXN10-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UBXN10-AS1
DMDM Disease mutations101928017
Blocks (Seattle)UBXN10-AS1
Human Protein Atlas [tissue]ENSG00000225986-UBXN10-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000225986
BioGRIDUBXN10-AS1
STRING (EMBL)UBXN10-AS1
ZODIACUBXN10-AS1
Ontologies - Pathways
Huge Navigator UBXN10-AS1 [HugePedia]
snp3D : Map Gene to Disease101928017
BioCentury BCIQUBXN10-AS1
ClinGenUBXN10-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928017
Clinical trialUBXN10-AS1
Miscellaneous
canSAR (ICR)UBXN10-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineUBXN10-AS1
EVEXUBXN10-AS1
GoPubMedUBXN10-AS1
iHOPUBXN10-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:20:48 CET 2017

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