Atlas of Genetics and Cytogenetics in Oncology and Haematology


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UCA1 (urothelial cancer associated 1)

Identity

Alias (NCBI)CUDR
LINC00178
NCRNA00178
UCAT1
onco-lncRNA-36
HGNC (Hugo) UCA1
HGNC Alias symbLINC00178
CUDR
UCAT1
onco-lncRNA-36
HGNC Alias namelong intergenic non-protein coding RNA 178
 cancer up-regulated drug resistant
HGNC Previous nameurothelial cancer associated 1 (non-protein coding)
LocusID (NCBI) 652995
Atlas_Id 43575
Location 19p13.12  [Link to chromosome band 19p13]
Location_base_pair Starts at 15828947 and ends at 15836321 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)UCA1   37126
Cards
Entrez_Gene (NCBI)UCA1    urothelial cancer associated 1
AliasesCUDR; LINC00178; NCRNA00178; UCAT1; 
onco-lncRNA-36
GeneCards (Weizmann)UCA1
Ensembl hg19 (Hinxton)ENSG00000214049 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214049 [Gene_View]  ENSG00000214049 [Sequence]  chr19:15828947-15836321 [Contig_View]  UCA1 [Vega]
ICGC DataPortalENSG00000214049
TCGA cBioPortalUCA1
AceView (NCBI)UCA1
Genatlas (Paris)UCA1
SOURCE (Princeton)UCA1
Genetics Home Reference (NIH)UCA1
Genomic and cartography
GoldenPath hg38 (UCSC)UCA1  -     chr19:15828947-15836321 +  19p13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UCA1  -     19p13.12   [Description]    (hg19-Feb_2009)
GoldenPathUCA1 - 19p13.12 [CytoView hg19]  UCA1 - 19p13.12 [CytoView hg38]
ImmunoBaseENSG00000214049
genome Data Viewer NCBIUCA1 [Mapview hg19]  
OMIM617500   
Gene and transcription
Genbank (Entrez)AK024303 AK092401 BC005351 BC017567 BC022824
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UCA1
Alternative Splicing GalleryENSG00000214049
Gene ExpressionUCA1 [ NCBI-GEO ]   UCA1 [ EBI - ARRAY_EXPRESS ]   UCA1 [ SEEK ]   UCA1 [ MEM ]
Gene Expression Viewer (FireBrowse)UCA1 [ Firebrowse - Broad ]
GenevisibleExpression of UCA1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)652995
GTEX Portal (Tissue expression)UCA1
Human Protein AtlasENSG00000214049-UCA1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UCA1
Blocks (Seattle)UCA1
Human Protein Atlas [tissue]ENSG00000214049-UCA1 [tissue]
Protein Interaction databases
BioGRIDUCA1
STRING (EMBL)UCA1
ZODIACUCA1
Ontologies - Pathways
Litterature
PubMed179 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXUCA1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 25 19:51:51 CET 2021

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