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UCKL1 (uridine-cytidine kinase 1 like 1)

Identity

Alias (NCBI)UCK1L
URKL1
HGNC (Hugo) UCKL1
HGNC Alias symbFLJ20517
HGNC Previous nameURKL1
HGNC Previous nameuridine kinase-like 1
 uridine-cytidine kinase 1-like 1
LocusID (NCBI) 54963
Atlas_Id 51318
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 63939829 and ends at 63956416 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DLGAP1 (18p11.31) / UCKL1 (20q13.33)UCKL1 (20q13.33) / SAMD10 (20q13.33)UCKL1 20q13.33 / SAMD10 20q13.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)UCKL1   15938
Cards
Entrez_Gene (NCBI)UCKL1    uridine-cytidine kinase 1 like 1
AliasesUCK1L; URKL1
GeneCards (Weizmann)UCKL1
Ensembl hg19 (Hinxton)ENSG00000198276 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198276 [Gene_View]  ENSG00000198276 [Sequence]  chr20:63939829-63956416 [Contig_View]  UCKL1 [Vega]
ICGC DataPortalENSG00000198276
TCGA cBioPortalUCKL1
AceView (NCBI)UCKL1
Genatlas (Paris)UCKL1
SOURCE (Princeton)UCKL1
Genetics Home Reference (NIH)UCKL1
Genomic and cartography
GoldenPath hg38 (UCSC)UCKL1  -     chr20:63939829-63956416 -  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UCKL1  -     20q13.33   [Description]    (hg19-Feb_2009)
GoldenPathUCKL1 - 20q13.33 [CytoView hg19]  UCKL1 - 20q13.33 [CytoView hg38]
ImmunoBaseENSG00000198276
Genome Data Viewer NCBIUCKL1 [Mapview hg19]  
OMIM610866   
Gene and transcription
Genbank (Entrez)AJ605558 AK000524 AK128082 AK222559 AK223220
RefSeq transcript (Entrez)NM_001193379 NM_001353475 NM_001353476 NM_001353477 NM_001353478 NM_001353479 NM_001353480 NM_001353481 NM_001353482 NM_017859
Consensus coding sequences : CCDS (NCBI)UCKL1
Gene ExpressionUCKL1 [ NCBI-GEO ]   UCKL1 [ EBI - ARRAY_EXPRESS ]   UCKL1 [ SEEK ]   UCKL1 [ MEM ]
Gene Expression Viewer (FireBrowse)UCKL1 [ Firebrowse - Broad ]
GenevisibleExpression of UCKL1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54963
GTEX Portal (Tissue expression)UCKL1
Human Protein AtlasENSG00000198276-UCKL1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NWZ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NWZ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NWZ5
PhosPhoSitePlusQ9NWZ5
Domains : Interpro (EBI)P-loop_NTPase    PRibTrfase_dom    PRK/URK    PRTase-like    UCKL1    Uridine_kinase-like   
Domain families : Pfam (Sanger)PRK (PF00485)   
Domain families : Pfam (NCBI)pfam00485   
Conserved Domain (NCBI)UCKL1
SuperfamilyQ9NWZ5
AlphaFold pdb e-kbQ9NWZ5   
Human Protein Atlas [tissue]ENSG00000198276-UCKL1 [tissue]
HPRD15607
Protein Interaction databases
DIP (DOE-UCLA)Q9NWZ5
IntAct (EBI)Q9NWZ5
BioGRIDUCKL1
STRING (EMBL)UCKL1
ZODIACUCKL1
Ontologies - Pathways
QuickGOQ9NWZ5
Ontology : AmiGOuridine kinase activity  protein binding  ATP binding  nucleus  cytoplasm  cytosol  phosphorylation  pyrimidine nucleoside salvage  UMP salvage  CTP salvage  
Ontology : EGO-EBIuridine kinase activity  protein binding  ATP binding  nucleus  cytoplasm  cytosol  phosphorylation  pyrimidine nucleoside salvage  UMP salvage  CTP salvage  
Pathways : KEGGPyrimidine metabolism    Drug metabolism - other enzymes   
NDEx NetworkUCKL1
Atlas of Cancer Signalling NetworkUCKL1
Wikipedia pathwaysUCKL1
Orthology - Evolution
OrthoDB54963
GeneTree (enSembl)ENSG00000198276
Phylogenetic Trees/Animal Genes : TreeFamUCKL1
Homologs : HomoloGeneUCKL1
Homology/Alignments : Family Browser (UCSC)UCKL1
Gene fusions - Rearrangements
Fusion : MitelmanUCKL1/SAMD10 [20q13.33/20q13.33]  
Fusion Cancer (Beijing)DLGAP1 [18p11.31]  -  UCKL1 [20q13.33]  [FUSC002369]
Fusion : QuiverUCKL1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUCKL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UCKL1
dbVarUCKL1
ClinVarUCKL1
MonarchUCKL1
1000_GenomesUCKL1 
Exome Variant ServerUCKL1
GNOMAD BrowserENSG00000198276
Varsome BrowserUCKL1
ACMGUCKL1 variants
VarityQ9NWZ5
Genomic Variants (DGV)UCKL1 [DGVbeta]
DECIPHERUCKL1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUCKL1 
Mutations
ICGC Data PortalUCKL1 
TCGA Data PortalUCKL1 
Broad Tumor PortalUCKL1
OASIS PortalUCKL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUCKL1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DUCKL1
Mutations and Diseases : HGMDUCKL1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaUCKL1
DgiDB (Drug Gene Interaction Database)UCKL1
DoCM (Curated mutations)UCKL1
CIViC (Clinical Interpretations of Variants in Cancer)UCKL1
Cancer3DUCKL1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610866   
Orphanet
DisGeNETUCKL1
MedgenUCKL1
Genetic Testing Registry UCKL1
NextProtQ9NWZ5 [Medical]
GENETestsUCKL1
Target ValidationUCKL1
Huge Navigator UCKL1 [HugePedia]
ClinGenUCKL1
Clinical trials, drugs, therapy
MyCancerGenomeUCKL1
Protein Interactions : CTDUCKL1
Pharm GKB GenePA38058
PharosQ9NWZ5
Clinical trialUCKL1
Miscellaneous
canSAR (ICR)UCKL1
HarmonizomeUCKL1
DataMed IndexUCKL1
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXUCKL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:37:18 CEST 2021

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