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UCP3 (uncoupling protein 3)

Identity

Alias_namesuncoupling protein 3 (mitochondrial
Alias_symbol (synonym)SLC25A9
Other alias
HGNC (Hugo) UCP3
LocusID (NCBI) 7352
Atlas_Id 43772
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 74000281 and ends at 74009237 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UCP3   12519
Cards
Entrez_Gene (NCBI)UCP3  7352  uncoupling protein 3
AliasesSLC25A9
GeneCards (Weizmann)UCP3
Ensembl hg19 (Hinxton)ENSG00000175564 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175564 [Gene_View]  chr11:74000281-74009237 [Contig_View]  UCP3 [Vega]
ICGC DataPortalENSG00000175564
TCGA cBioPortalUCP3
AceView (NCBI)UCP3
Genatlas (Paris)UCP3
WikiGenes7352
SOURCE (Princeton)UCP3
Genetics Home Reference (NIH)UCP3
Genomic and cartography
GoldenPath hg38 (UCSC)UCP3  -     chr11:74000281-74009237 -  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UCP3  -     11q13.4   [Description]    (hg19-Feb_2009)
EnsemblUCP3 - 11q13.4 [CytoView hg19]  UCP3 - 11q13.4 [CytoView hg38]
Mapping of homologs : NCBIUCP3 [Mapview hg19]  UCP3 [Mapview hg38]
OMIM601665   602044   
Gene and transcription
Genbank (Entrez)AF001787 AF011449 AK092685 AK290630 AK291889
RefSeq transcript (Entrez)NM_003356 NM_022803
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UCP3
Cluster EST : UnigeneHs.621879 [ NCBI ]
CGAP (NCI)Hs.621879
Alternative Splicing GalleryENSG00000175564
Gene ExpressionUCP3 [ NCBI-GEO ]   UCP3 [ EBI - ARRAY_EXPRESS ]   UCP3 [ SEEK ]   UCP3 [ MEM ]
Gene Expression Viewer (FireBrowse)UCP3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7352
GTEX Portal (Tissue expression)UCP3
Protein : pattern, domain, 3D structure
UniProt/SwissProtP55916   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP55916  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP55916
Splice isoforms : SwissVarP55916
PhosPhoSitePlusP55916
Domaine pattern : Prosite (Expaxy)SOLCAR (PS50920)   
Domains : Interpro (EBI)Mit_uncoupling    Mitochondrial_sb/sol_carrier    Mt_carrier_dom   
Domain families : Pfam (Sanger)Mito_carr (PF00153)   
Domain families : Pfam (NCBI)pfam00153   
Conserved Domain (NCBI)UCP3
DMDM Disease mutations7352
Blocks (Seattle)UCP3
SuperfamilyP55916
Human Protein AtlasENSG00000175564
Peptide AtlasP55916
HPRD03623
IPIIPI00026815   IPI00221047   IPI01018886   IPI00953475   
Protein Interaction databases
DIP (DOE-UCLA)P55916
IntAct (EBI)P55916
FunCoupENSG00000175564
BioGRIDUCP3
STRING (EMBL)UCP3
ZODIACUCP3
Ontologies - Pathways
QuickGOP55916
Ontology : AmiGOresponse to superoxide  response to hypoxia  transporter activity  protein binding  mitochondrion  mitochondrial inner membrane  mitochondrial inner membrane  lipid metabolic process  fatty acid metabolic process  aging  response to nutrient  respiratory gaseous exchange  response to cold  response to activity  proton transport  integral component of membrane  oxidative phosphorylation uncoupler activity  response to insulin  cellular response to hormone stimulus  response to glucocorticoid  mitochondrial transmembrane transport  adaptive thermogenesis  
Ontology : EGO-EBIresponse to superoxide  response to hypoxia  transporter activity  protein binding  mitochondrion  mitochondrial inner membrane  mitochondrial inner membrane  lipid metabolic process  fatty acid metabolic process  aging  response to nutrient  respiratory gaseous exchange  response to cold  response to activity  proton transport  integral component of membrane  oxidative phosphorylation uncoupler activity  response to insulin  cellular response to hormone stimulus  response to glucocorticoid  mitochondrial transmembrane transport  adaptive thermogenesis  
NDEx NetworkUCP3
Atlas of Cancer Signalling NetworkUCP3
Wikipedia pathwaysUCP3
Orthology - Evolution
OrthoDB7352
GeneTree (enSembl)ENSG00000175564
Phylogenetic Trees/Animal Genes : TreeFamUCP3
HOVERGENP55916
HOGENOMP55916
Homologs : HomoloGeneUCP3
Homology/Alignments : Family Browser (UCSC)UCP3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUCP3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UCP3
dbVarUCP3
ClinVarUCP3
1000_GenomesUCP3 
Exome Variant ServerUCP3
ExAC (Exome Aggregation Consortium)UCP3 (select the gene name)
Genetic variants : HAPMAP7352
Genomic Variants (DGV)UCP3 [DGVbeta]
DECIPHERUCP3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUCP3 
Mutations
ICGC Data PortalUCP3 
TCGA Data PortalUCP3 
Broad Tumor PortalUCP3
OASIS PortalUCP3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUCP3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUCP3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch UCP3
DgiDB (Drug Gene Interaction Database)UCP3
DoCM (Curated mutations)UCP3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UCP3 (select a term)
intoGenUCP3
Cancer3DUCP3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601665    602044   
Orphanet
MedgenUCP3
Genetic Testing Registry UCP3
NextProtP55916 [Medical]
TSGene7352
GENETestsUCP3
Huge Navigator UCP3 [HugePedia]
snp3D : Map Gene to Disease7352
BioCentury BCIQUCP3
ClinGenUCP3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7352
Chemical/Pharm GKB GenePA37166
Clinical trialUCP3
Miscellaneous
canSAR (ICR)UCP3 (select the gene name)
Probes
Litterature
PubMed170 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUCP3
EVEXUCP3
GoPubMedUCP3
iHOPUCP3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:43:14 CEST 2017

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