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UGP2 (UDP-glucose pyrophosphorylase 2)

Identity

Alias_namesUGP1
UDP-glucose pyrophosphorylase 1
Alias_symbol (synonym)UGPP1
Other aliasUDPG
UDPGP
UDPGP2
UGPP2
pHC379
HGNC (Hugo) UGP2
LocusID (NCBI) 7360
Atlas_Id 54750
Location 2p15  [Link to chromosome band 2p15]
Location_base_pair Starts at 63840964 and ends at 63891562 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CIRBP (19p13.3) / UGP2 (2p15)EHBP1 (2p15) / UGP2 (2p15)MFGE8 (15q26.1) / UGP2 (2p15)
UGP2 (2p15) / CECR2 (22q11.1)UGP2 (2p15) / CSE1L (20q13.13)UGP2 (2p15) / UGP2 (2p15)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UGP2   12527
Cards
Entrez_Gene (NCBI)UGP2  7360  UDP-glucose pyrophosphorylase 2
AliasesUDPG; UDPGP; UDPGP2; UGP1; 
UGPP1; UGPP2; pHC379
GeneCards (Weizmann)UGP2
Ensembl hg19 (Hinxton)ENSG00000169764 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169764 [Gene_View]  chr2:63840964-63891562 [Contig_View]  UGP2 [Vega]
ICGC DataPortalENSG00000169764
TCGA cBioPortalUGP2
AceView (NCBI)UGP2
Genatlas (Paris)UGP2
WikiGenes7360
SOURCE (Princeton)UGP2
Genetics Home Reference (NIH)UGP2
Genomic and cartography
GoldenPath hg38 (UCSC)UGP2  -     chr2:63840964-63891562 +  2p15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UGP2  -     2p15   [Description]    (hg19-Feb_2009)
EnsemblUGP2 - 2p15 [CytoView hg19]  UGP2 - 2p15 [CytoView hg38]
Mapping of homologs : NCBIUGP2 [Mapview hg19]  UGP2 [Mapview hg38]
OMIM191760   
Gene and transcription
Genbank (Entrez)AF086113 AK300731 AK314263 BC000173 BC002954
RefSeq transcript (Entrez)NM_001001521 NM_006759
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UGP2
Cluster EST : UnigeneHs.516217 [ NCBI ]
CGAP (NCI)Hs.516217
Alternative Splicing GalleryENSG00000169764
Gene ExpressionUGP2 [ NCBI-GEO ]   UGP2 [ EBI - ARRAY_EXPRESS ]   UGP2 [ SEEK ]   UGP2 [ MEM ]
Gene Expression Viewer (FireBrowse)UGP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7360
GTEX Portal (Tissue expression)UGP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16851   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ16851  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ16851
Splice isoforms : SwissVarQ16851
Catalytic activity : Enzyme2.7.7.9 [ Enzyme-Expasy ]   2.7.7.92.7.7.9 [ IntEnz-EBI ]   2.7.7.9 [ BRENDA ]   2.7.7.9 [ KEGG ]   
PhosPhoSitePlusQ16851
Domains : Interpro (EBI)Nucleotide-diphossugar_trans    UDPGP_fam    UDPGP_trans   
Domain families : Pfam (Sanger)UDPGP (PF01704)   
Domain families : Pfam (NCBI)pfam01704   
Conserved Domain (NCBI)UGP2
DMDM Disease mutations7360
Blocks (Seattle)UGP2
PDB (SRS)3R2W    3R3I    4R7P   
PDB (PDBSum)3R2W    3R3I    4R7P   
PDB (IMB)3R2W    3R3I    4R7P   
PDB (RSDB)3R2W    3R3I    4R7P   
Structural Biology KnowledgeBase3R2W    3R3I    4R7P   
SCOP (Structural Classification of Proteins)3R2W    3R3I    4R7P   
CATH (Classification of proteins structures)3R2W    3R3I    4R7P   
SuperfamilyQ16851
Human Protein AtlasENSG00000169764
Peptide AtlasQ16851
HPRD08934
IPIIPI00329331   IPI00395676   IPI00873223   IPI00945112   IPI00946012   IPI00946690   IPI00947015   IPI00946245   IPI00945282   IPI00946068   IPI00946516   IPI00945447   IPI00946873   IPI01013397   IPI00946647   IPI00945711   
Protein Interaction databases
DIP (DOE-UCLA)Q16851
IntAct (EBI)Q16851
FunCoupENSG00000169764
BioGRIDUGP2
STRING (EMBL)UGP2
ZODIACUGP2
Ontologies - Pathways
QuickGOQ16851
Ontology : AmiGOUTP:glucose-1-phosphate uridylyltransferase activity  UTP:glucose-1-phosphate uridylyltransferase activity  protein binding  glucose binding  nucleus  cytoplasm  cytosol  glycogen metabolic process  glycogen biosynthetic process  UDP-glucose metabolic process  UDP-glucuronate biosynthetic process  glucose 1-phosphate metabolic process  pyrimidine ribonucleotide binding  identical protein binding  metal ion binding  extracellular exosome  
Ontology : EGO-EBIUTP:glucose-1-phosphate uridylyltransferase activity  UTP:glucose-1-phosphate uridylyltransferase activity  protein binding  glucose binding  nucleus  cytoplasm  cytosol  glycogen metabolic process  glycogen biosynthetic process  UDP-glucose metabolic process  UDP-glucuronate biosynthetic process  glucose 1-phosphate metabolic process  pyrimidine ribonucleotide binding  identical protein binding  metal ion binding  extracellular exosome  
Pathways : KEGGPentose and glucuronate interconversions    Galactose metabolism    Starch and sucrose metabolism    Amino sugar and nucleotide sugar metabolism   
NDEx NetworkUGP2
Atlas of Cancer Signalling NetworkUGP2
Wikipedia pathwaysUGP2
Orthology - Evolution
OrthoDB7360
GeneTree (enSembl)ENSG00000169764
Phylogenetic Trees/Animal Genes : TreeFamUGP2
HOVERGENQ16851
HOGENOMQ16851
Homologs : HomoloGeneUGP2
Homology/Alignments : Family Browser (UCSC)UGP2
Gene fusions - Rearrangements
Fusion : MitelmanCIRBP/UGP2 [19p13.3/2p15]  [t(2;19)(p15;p13)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUGP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UGP2
dbVarUGP2
ClinVarUGP2
1000_GenomesUGP2 
Exome Variant ServerUGP2
ExAC (Exome Aggregation Consortium)UGP2 (select the gene name)
Genetic variants : HAPMAP7360
Genomic Variants (DGV)UGP2 [DGVbeta]
DECIPHERUGP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUGP2 
Mutations
ICGC Data PortalUGP2 
TCGA Data PortalUGP2 
Broad Tumor PortalUGP2
OASIS PortalUGP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUGP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUGP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UGP2
DgiDB (Drug Gene Interaction Database)UGP2
DoCM (Curated mutations)UGP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UGP2 (select a term)
intoGenUGP2
Cancer3DUGP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM191760   
Orphanet
MedgenUGP2
Genetic Testing Registry UGP2
NextProtQ16851 [Medical]
TSGene7360
GENETestsUGP2
Target ValidationUGP2
Huge Navigator UGP2 [HugePedia]
snp3D : Map Gene to Disease7360
BioCentury BCIQUGP2
ClinGenUGP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7360
Chemical/Pharm GKB GenePA37172
Clinical trialUGP2
Miscellaneous
canSAR (ICR)UGP2 (select the gene name)
Probes
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUGP2
EVEXUGP2
GoPubMedUGP2
iHOPUGP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:37:20 CEST 2017

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