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UGT2B10 (UDP glucuronosyltransferase family 2 member B10)

Identity

Alias_namesUDP glycosyltransferase 2 family
Other aliasUDPGT2B10
HGNC (Hugo) UGT2B10
LocusID (NCBI) 7365
Atlas_Id 50141
Location 4q13.2  [Link to chromosome band 4q13]
Location_base_pair Starts at 68815993 and ends at 68832017 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SLC16A1 (1p13.2) / UGT2B10 (4q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UGT2B10   12544
Cards
Entrez_Gene (NCBI)UGT2B10  7365  UDP glucuronosyltransferase family 2 member B10
AliasesUDPGT2B10
GeneCards (Weizmann)UGT2B10
Ensembl hg19 (Hinxton)ENSG00000109181 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000109181 [Gene_View]  chr4:68815993-68832017 [Contig_View]  UGT2B10 [Vega]
ICGC DataPortalENSG00000109181
TCGA cBioPortalUGT2B10
AceView (NCBI)UGT2B10
Genatlas (Paris)UGT2B10
WikiGenes7365
SOURCE (Princeton)UGT2B10
Genetics Home Reference (NIH)UGT2B10
Genomic and cartography
GoldenPath hg38 (UCSC)UGT2B10  -     chr4:68815993-68832017 +  4q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UGT2B10  -     4q13.2   [Description]    (hg19-Feb_2009)
EnsemblUGT2B10 - 4q13.2 [CytoView hg19]  UGT2B10 - 4q13.2 [CytoView hg38]
Mapping of homologs : NCBIUGT2B10 [Mapview hg19]  UGT2B10 [Mapview hg38]
OMIM600070   
Gene and transcription
Genbank (Entrez)AK222839 AK222872 AK292738 AK298432 BC113649
RefSeq transcript (Entrez)NM_001075 NM_001144767 NM_001290091
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_167250
Consensus coding sequences : CCDS (NCBI)UGT2B10
Cluster EST : UnigeneHs.201634 [ NCBI ]
CGAP (NCI)Hs.201634
Alternative Splicing GalleryENSG00000109181
Gene ExpressionUGT2B10 [ NCBI-GEO ]   UGT2B10 [ EBI - ARRAY_EXPRESS ]   UGT2B10 [ SEEK ]   UGT2B10 [ MEM ]
Gene Expression Viewer (FireBrowse)UGT2B10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7365
GTEX Portal (Tissue expression)UGT2B10
Protein : pattern, domain, 3D structure
UniProt/SwissProtP36537   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP36537  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP36537
Splice isoforms : SwissVarP36537
Catalytic activity : Enzyme2.4.1.17 [ Enzyme-Expasy ]   2.4.1.172.4.1.17 [ IntEnz-EBI ]   2.4.1.17 [ BRENDA ]   2.4.1.17 [ KEGG ]   
PhosPhoSitePlusP36537
Domaine pattern : Prosite (Expaxy)UDPGT (PS00375)   
Domains : Interpro (EBI)UDP_glucos_trans   
Domain families : Pfam (Sanger)UDPGT (PF00201)   
Domain families : Pfam (NCBI)pfam00201   
Conserved Domain (NCBI)UGT2B10
DMDM Disease mutations7365
Blocks (Seattle)UGT2B10
SuperfamilyP36537
Human Protein AtlasENSG00000109181
Peptide AtlasP36537
HPRD07193
IPIIPI00003836   IPI00921045   
Protein Interaction databases
DIP (DOE-UCLA)P36537
IntAct (EBI)P36537
FunCoupENSG00000109181
BioGRIDUGT2B10
STRING (EMBL)UGT2B10
ZODIACUGT2B10
Ontologies - Pathways
QuickGOP36537
Ontology : AmiGOendoplasmic reticulum membrane  lipid metabolic process  glucuronosyltransferase activity  integral component of membrane  organelle membrane  intracellular membrane-bounded organelle  
Ontology : EGO-EBIendoplasmic reticulum membrane  lipid metabolic process  glucuronosyltransferase activity  integral component of membrane  organelle membrane  intracellular membrane-bounded organelle  
Pathways : KEGG   
NDEx NetworkUGT2B10
Atlas of Cancer Signalling NetworkUGT2B10
Wikipedia pathwaysUGT2B10
Orthology - Evolution
OrthoDB7365
GeneTree (enSembl)ENSG00000109181
Phylogenetic Trees/Animal Genes : TreeFamUGT2B10
HOVERGENP36537
HOGENOMP36537
Homologs : HomoloGeneUGT2B10
Homology/Alignments : Family Browser (UCSC)UGT2B10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUGT2B10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UGT2B10
dbVarUGT2B10
ClinVarUGT2B10
1000_GenomesUGT2B10 
Exome Variant ServerUGT2B10
ExAC (Exome Aggregation Consortium)UGT2B10 (select the gene name)
Genetic variants : HAPMAP7365
Genomic Variants (DGV)UGT2B10 [DGVbeta]
DECIPHERUGT2B10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUGT2B10 
Mutations
ICGC Data PortalUGT2B10 
TCGA Data PortalUGT2B10 
Broad Tumor PortalUGT2B10
OASIS PortalUGT2B10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUGT2B10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUGT2B10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UGT2B10
DgiDB (Drug Gene Interaction Database)UGT2B10
DoCM (Curated mutations)UGT2B10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UGT2B10 (select a term)
intoGenUGT2B10
Cancer3DUGT2B10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600070   
Orphanet
MedgenUGT2B10
Genetic Testing Registry UGT2B10
NextProtP36537 [Medical]
TSGene7365
GENETestsUGT2B10
Target ValidationUGT2B10
Huge Navigator UGT2B10 [HugePedia]
snp3D : Map Gene to Disease7365
BioCentury BCIQUGT2B10
ClinGenUGT2B10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7365
Chemical/Pharm GKB GenePA37186
Clinical trialUGT2B10
Miscellaneous
canSAR (ICR)UGT2B10 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUGT2B10
EVEXUGT2B10
GoPubMedUGT2B10
iHOPUGT2B10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 13:01:53 CEST 2017

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