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UGT2B11 (UDP glucuronosyltransferase family 2 member B11)

Identity

Alias_namesUDP glycosyltransferase 2 family, polypeptide B11
Other alias-
HGNC (Hugo) UGT2B11
LocusID (NCBI) 10720
Atlas_Id 75472
Location 4q13.2  [Link to chromosome band 4q13]
Location_base_pair Starts at 69200190 and ends at 69214731 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UGT2B11   12545
Cards
Entrez_Gene (NCBI)UGT2B11  10720  UDP glucuronosyltransferase family 2 member B11
Aliases
GeneCards (Weizmann)UGT2B11
Ensembl hg19 (Hinxton)ENSG00000213759 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213759 [Gene_View]  chr4:69200190-69214731 [Contig_View]  UGT2B11 [Vega]
ICGC DataPortalENSG00000213759
TCGA cBioPortalUGT2B11
AceView (NCBI)UGT2B11
Genatlas (Paris)UGT2B11
WikiGenes10720
SOURCE (Princeton)UGT2B11
Genetics Home Reference (NIH)UGT2B11
Genomic and cartography
GoldenPath hg38 (UCSC)UGT2B11  -     chr4:69200190-69214731 -  4q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UGT2B11  -     4q13.2   [Description]    (hg19-Feb_2009)
EnsemblUGT2B11 - 4q13.2 [CytoView hg19]  UGT2B11 - 4q13.2 [CytoView hg38]
Mapping of homologs : NCBIUGT2B11 [Mapview hg19]  UGT2B11 [Mapview hg38]
OMIM603064   
Gene and transcription
Genbank (Entrez)AF016492 BC069441 BC107059 BC107060 BG184936
RefSeq transcript (Entrez)NM_001073
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UGT2B11
Cluster EST : UnigeneHs.339811 [ NCBI ]
CGAP (NCI)Hs.339811
Alternative Splicing GalleryENSG00000213759
Gene ExpressionUGT2B11 [ NCBI-GEO ]   UGT2B11 [ EBI - ARRAY_EXPRESS ]   UGT2B11 [ SEEK ]   UGT2B11 [ MEM ]
Gene Expression Viewer (FireBrowse)UGT2B11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10720
GTEX Portal (Tissue expression)UGT2B11
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75310   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75310  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75310
Splice isoforms : SwissVarO75310
Catalytic activity : Enzyme2.4.1.17 [ Enzyme-Expasy ]   2.4.1.172.4.1.17 [ IntEnz-EBI ]   2.4.1.17 [ BRENDA ]   2.4.1.17 [ KEGG ]   
PhosPhoSitePlusO75310
Domaine pattern : Prosite (Expaxy)UDPGT (PS00375)   
Domains : Interpro (EBI)UDP_glucos_trans   
Domain families : Pfam (Sanger)UDPGT (PF00201)   
Domain families : Pfam (NCBI)pfam00201   
Conserved Domain (NCBI)UGT2B11
DMDM Disease mutations10720
Blocks (Seattle)UGT2B11
SuperfamilyO75310
Human Protein AtlasENSG00000213759
Peptide AtlasO75310
HPRD04345
IPIIPI00025242   
Protein Interaction databases
DIP (DOE-UCLA)O75310
IntAct (EBI)O75310
FunCoupENSG00000213759
BioGRIDUGT2B11
STRING (EMBL)UGT2B11
ZODIACUGT2B11
Ontologies - Pathways
QuickGOO75310
Ontology : AmiGOendoplasmic reticulum membrane  xenobiotic metabolic process  estrogen metabolic process  glucuronosyltransferase activity  integral component of membrane  organelle membrane  intracellular membrane-bounded organelle  
Ontology : EGO-EBIendoplasmic reticulum membrane  xenobiotic metabolic process  estrogen metabolic process  glucuronosyltransferase activity  integral component of membrane  organelle membrane  intracellular membrane-bounded organelle  
Pathways : KEGGPentose and glucuronate interconversions    Ascorbate and aldarate metabolism    Steroid hormone biosynthesis    Starch and sucrose metabolism    Retinol metabolism    Porphyrin and chlorophyll metabolism    Metabolism of xenobiotics by cytochrome P450    Drug metabolism - cytochrome P450    Drug metabolism - other enzymes    Chemical carcinogenesis   
NDEx NetworkUGT2B11
Atlas of Cancer Signalling NetworkUGT2B11
Wikipedia pathwaysUGT2B11
Orthology - Evolution
OrthoDB10720
GeneTree (enSembl)ENSG00000213759
Phylogenetic Trees/Animal Genes : TreeFamUGT2B11
HOVERGENO75310
HOGENOMO75310
Homologs : HomoloGeneUGT2B11
Homology/Alignments : Family Browser (UCSC)UGT2B11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUGT2B11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UGT2B11
dbVarUGT2B11
ClinVarUGT2B11
1000_GenomesUGT2B11 
Exome Variant ServerUGT2B11
ExAC (Exome Aggregation Consortium)UGT2B11 (select the gene name)
Genetic variants : HAPMAP10720
Genomic Variants (DGV)UGT2B11 [DGVbeta]
DECIPHERUGT2B11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUGT2B11 
Mutations
ICGC Data PortalUGT2B11 
TCGA Data PortalUGT2B11 
Broad Tumor PortalUGT2B11
OASIS PortalUGT2B11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUGT2B11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUGT2B11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UGT2B11
DgiDB (Drug Gene Interaction Database)UGT2B11
DoCM (Curated mutations)UGT2B11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UGT2B11 (select a term)
intoGenUGT2B11
Cancer3DUGT2B11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603064   
Orphanet
MedgenUGT2B11
Genetic Testing Registry UGT2B11
NextProtO75310 [Medical]
TSGene10720
GENETestsUGT2B11
Target ValidationUGT2B11
Huge Navigator UGT2B11 [HugePedia]
snp3D : Map Gene to Disease10720
BioCentury BCIQUGT2B11
ClinGenUGT2B11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10720
Chemical/Pharm GKB GenePA37187
Clinical trialUGT2B11
Miscellaneous
canSAR (ICR)UGT2B11 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUGT2B11
EVEXUGT2B11
GoPubMedUGT2B11
iHOPUGT2B11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:43:14 CEST 2017

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