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UGT3A1 (UDP glycosyltransferase 3 family, polypeptide A1)

Identity

Alias_namesUDP glycosyltransferase 3 family, polypeptide A1
Alias_symbol (synonym)FLJ34658
Other alias-
HGNC (Hugo) UGT3A1
LocusID (NCBI) 133688
Atlas_Id 75474
Location 5p13.2  [Link to chromosome band 5p13]
Location_base_pair Starts at 35960858 and ends at 36001130 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UGT3A1   26625
Cards
Entrez_Gene (NCBI)UGT3A1  133688  UDP glycosyltransferase 3 family, polypeptide A1
Aliases
GeneCards (Weizmann)UGT3A1
Ensembl hg19 (Hinxton)ENSG00000145626 [Gene_View]  chr5:35960858-36001130 [Contig_View]  UGT3A1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000145626 [Gene_View]  chr5:35960858-36001130 [Contig_View]  UGT3A1 [Vega]
ICGC DataPortalENSG00000145626
TCGA cBioPortalUGT3A1
AceView (NCBI)UGT3A1
Genatlas (Paris)UGT3A1
WikiGenes133688
SOURCE (Princeton)UGT3A1
Genetics Home Reference (NIH)UGT3A1
Genomic and cartography
GoldenPath hg19 (UCSC)UGT3A1  -     chr5:35960858-36001130 -  5p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)UGT3A1  -     5p13.2   [Description]    (hg38-Dec_2013)
EnsemblUGT3A1 - 5p13.2 [CytoView hg19]  UGT3A1 - 5p13.2 [CytoView hg38]
Mapping of homologs : NCBIUGT3A1 [Mapview hg19]  UGT3A1 [Mapview hg38]
OMIM616383   
Gene and transcription
Genbank (Entrez)AI244517 AK057066 AK091977 AK125803 AK290809
RefSeq transcript (Entrez)NM_001171873 NM_152404
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_006576 NW_004929321
Consensus coding sequences : CCDS (NCBI)UGT3A1
Cluster EST : UnigeneHs.254699 [ NCBI ]
CGAP (NCI)Hs.254699
Alternative Splicing GalleryENSG00000145626
Gene ExpressionUGT3A1 [ NCBI-GEO ]   UGT3A1 [ EBI - ARRAY_EXPRESS ]   UGT3A1 [ SEEK ]   UGT3A1 [ MEM ]
Gene Expression Viewer (FireBrowse)UGT3A1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)133688
GTEX Portal (Tissue expression)UGT3A1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6NUS8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6NUS8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6NUS8
Splice isoforms : SwissVarQ6NUS8
Catalytic activity : Enzyme2.4.1.17 [ Enzyme-Expasy ]   2.4.1.172.4.1.17 [ IntEnz-EBI ]   2.4.1.17 [ BRENDA ]   2.4.1.17 [ KEGG ]   
PhosPhoSitePlusQ6NUS8
Domaine pattern : Prosite (Expaxy)UDPGT (PS00375)   
Domains : Interpro (EBI)UDP_glucos_trans   
Domain families : Pfam (Sanger)UDPGT (PF00201)   
Domain families : Pfam (NCBI)pfam00201   
Conserved Domain (NCBI)UGT3A1
DMDM Disease mutations133688
Blocks (Seattle)UGT3A1
SuperfamilyQ6NUS8
Human Protein AtlasENSG00000145626
Peptide AtlasQ6NUS8
HPRD08175
IPIIPI00060990   IPI00217861   IPI00922918   IPI00966458   IPI00966749   
Protein Interaction databases
DIP (DOE-UCLA)Q6NUS8
IntAct (EBI)Q6NUS8
FunCoupENSG00000145626
BioGRIDUGT3A1
STRING (EMBL)UGT3A1
ZODIACUGT3A1
Ontologies - Pathways
QuickGOQ6NUS8
Ontology : AmiGOUDP-glycosyltransferase activity  flavonoid biosynthetic process  glucuronosyltransferase activity  integral component of membrane  cellular response to hormone stimulus  intracellular membrane-bounded organelle  UDP-N-acetylglucosamine transferase complex  flavonoid glucuronidation  
Ontology : EGO-EBIUDP-glycosyltransferase activity  flavonoid biosynthetic process  glucuronosyltransferase activity  integral component of membrane  cellular response to hormone stimulus  intracellular membrane-bounded organelle  UDP-N-acetylglucosamine transferase complex  flavonoid glucuronidation  
NDEx NetworkUGT3A1
Atlas of Cancer Signalling NetworkUGT3A1
Wikipedia pathwaysUGT3A1
Orthology - Evolution
OrthoDB133688
GeneTree (enSembl)ENSG00000145626
Phylogenetic Trees/Animal Genes : TreeFamUGT3A1
HOVERGENQ6NUS8
HOGENOMQ6NUS8
Homologs : HomoloGeneUGT3A1
Homology/Alignments : Family Browser (UCSC)UGT3A1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUGT3A1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UGT3A1
dbVarUGT3A1
ClinVarUGT3A1
1000_GenomesUGT3A1 
Exome Variant ServerUGT3A1
ExAC (Exome Aggregation Consortium)UGT3A1 (select the gene name)
Genetic variants : HAPMAP133688
Genomic Variants (DGV)UGT3A1 [DGVbeta]
DECIPHER (Syndromes)5:35960858-36001130  ENSG00000145626
CONAN: Copy Number AnalysisUGT3A1 
Mutations
ICGC Data PortalUGT3A1 
TCGA Data PortalUGT3A1 
Broad Tumor PortalUGT3A1
OASIS PortalUGT3A1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUGT3A1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUGT3A1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UGT3A1
DgiDB (Drug Gene Interaction Database)UGT3A1
DoCM (Curated mutations)UGT3A1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UGT3A1 (select a term)
intoGenUGT3A1
Cancer3DUGT3A1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616383   
Orphanet
MedgenUGT3A1
Genetic Testing Registry UGT3A1
NextProtQ6NUS8 [Medical]
TSGene133688
GENETestsUGT3A1
Huge Navigator UGT3A1 [HugePedia]
snp3D : Map Gene to Disease133688
BioCentury BCIQUGT3A1
ClinGenUGT3A1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD133688
Chemical/Pharm GKB GenePA142670642
Clinical trialUGT3A1
Miscellaneous
canSAR (ICR)UGT3A1 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUGT3A1
EVEXUGT3A1
GoPubMedUGT3A1
iHOPUGT3A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:50:47 CET 2017

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