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UGT3A2 (UDP glycosyltransferase 3 family, polypeptide A2)

Identity

Alias_namesUDP glycosyltransferase 3 family, polypeptide A2
Other alias-
HGNC (Hugo) UGT3A2
LocusID (NCBI) 167127
Atlas_Id 75475
Location 5p13.2  [Link to chromosome band 5p13]
Location_base_pair Starts at 36035119 and ends at 36067023 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
UGT3A2 (5p13.2) / HBB (11p15.4)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UGT3A2   27266
Cards
Entrez_Gene (NCBI)UGT3A2  167127  UDP glycosyltransferase 3 family, polypeptide A2
Aliases
GeneCards (Weizmann)UGT3A2
Ensembl hg19 (Hinxton)ENSG00000168671 [Gene_View]  chr5:36035119-36067023 [Contig_View]  UGT3A2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000168671 [Gene_View]  chr5:36035119-36067023 [Contig_View]  UGT3A2 [Vega]
ICGC DataPortalENSG00000168671
TCGA cBioPortalUGT3A2
AceView (NCBI)UGT3A2
Genatlas (Paris)UGT3A2
WikiGenes167127
SOURCE (Princeton)UGT3A2
Genetics Home Reference (NIH)UGT3A2
Genomic and cartography
GoldenPath hg19 (UCSC)UGT3A2  -     chr5:36035119-36067023 -  5p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)UGT3A2  -     5p13.2   [Description]    (hg38-Dec_2013)
EnsemblUGT3A2 - 5p13.2 [CytoView hg19]  UGT3A2 - 5p13.2 [CytoView hg38]
Mapping of homologs : NCBIUGT3A2 [Mapview hg19]  UGT3A2 [Mapview hg38]
OMIM616384   
Gene and transcription
Genbank (Entrez)AK075383 AK300751 AK303154 AY358416 BC103924
RefSeq transcript (Entrez)NM_001168316 NM_174914
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_006576 NW_004929321
Consensus coding sequences : CCDS (NCBI)UGT3A2
Cluster EST : UnigeneHs.348941 [ NCBI ]
CGAP (NCI)Hs.348941
Alternative Splicing GalleryENSG00000168671
Gene ExpressionUGT3A2 [ NCBI-GEO ]   UGT3A2 [ EBI - ARRAY_EXPRESS ]   UGT3A2 [ SEEK ]   UGT3A2 [ MEM ]
Gene Expression Viewer (FireBrowse)UGT3A2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)167127
GTEX Portal (Tissue expression)UGT3A2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3SY77   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3SY77  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3SY77
Splice isoforms : SwissVarQ3SY77
Catalytic activity : Enzyme2.4.1.17 [ Enzyme-Expasy ]   2.4.1.172.4.1.17 [ IntEnz-EBI ]   2.4.1.17 [ BRENDA ]   2.4.1.17 [ KEGG ]   
PhosPhoSitePlusQ3SY77
Domaine pattern : Prosite (Expaxy)UDPGT (PS00375)   
Domains : Interpro (EBI)UDP_glucos_trans   
Domain families : Pfam (Sanger)UDPGT (PF00201)   
Domain families : Pfam (NCBI)pfam00201   
Conserved Domain (NCBI)UGT3A2
DMDM Disease mutations167127
Blocks (Seattle)UGT3A2
SuperfamilyQ3SY77
Human Protein AtlasENSG00000168671
Peptide AtlasQ3SY77
HPRD14111
IPIIPI00168291   IPI01012653   IPI00954563   IPI00965086   IPI00965378   
Protein Interaction databases
DIP (DOE-UCLA)Q3SY77
IntAct (EBI)Q3SY77
FunCoupENSG00000168671
BioGRIDUGT3A2
STRING (EMBL)UGT3A2
ZODIACUGT3A2
Ontologies - Pathways
QuickGOQ3SY77
Ontology : AmiGOUDP-glycosyltransferase activity  flavonoid biosynthetic process  glucuronosyltransferase activity  integral component of membrane  intracellular membrane-bounded organelle  flavonoid glucuronidation  cellular response to genistein  
Ontology : EGO-EBIUDP-glycosyltransferase activity  flavonoid biosynthetic process  glucuronosyltransferase activity  integral component of membrane  intracellular membrane-bounded organelle  flavonoid glucuronidation  cellular response to genistein  
NDEx NetworkUGT3A2
Atlas of Cancer Signalling NetworkUGT3A2
Wikipedia pathwaysUGT3A2
Orthology - Evolution
OrthoDB167127
GeneTree (enSembl)ENSG00000168671
Phylogenetic Trees/Animal Genes : TreeFamUGT3A2
HOVERGENQ3SY77
HOGENOMQ3SY77
Homologs : HomoloGeneUGT3A2
Homology/Alignments : Family Browser (UCSC)UGT3A2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUGT3A2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UGT3A2
dbVarUGT3A2
ClinVarUGT3A2
1000_GenomesUGT3A2 
Exome Variant ServerUGT3A2
ExAC (Exome Aggregation Consortium)UGT3A2 (select the gene name)
Genetic variants : HAPMAP167127
Genomic Variants (DGV)UGT3A2 [DGVbeta]
DECIPHER (Syndromes)5:36035119-36067023  ENSG00000168671
CONAN: Copy Number AnalysisUGT3A2 
Mutations
ICGC Data PortalUGT3A2 
TCGA Data PortalUGT3A2 
Broad Tumor PortalUGT3A2
OASIS PortalUGT3A2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUGT3A2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUGT3A2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UGT3A2
DgiDB (Drug Gene Interaction Database)UGT3A2
DoCM (Curated mutations)UGT3A2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UGT3A2 (select a term)
intoGenUGT3A2
Cancer3DUGT3A2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616384   
Orphanet
MedgenUGT3A2
Genetic Testing Registry UGT3A2
NextProtQ3SY77 [Medical]
TSGene167127
GENETestsUGT3A2
Huge Navigator UGT3A2 [HugePedia]
snp3D : Map Gene to Disease167127
BioCentury BCIQUGT3A2
ClinGenUGT3A2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD167127
Chemical/Pharm GKB GenePA142670643
Clinical trialUGT3A2
Miscellaneous
canSAR (ICR)UGT3A2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUGT3A2
EVEXUGT3A2
GoPubMedUGT3A2
iHOPUGT3A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:50:47 CET 2017

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