Atlas of Genetics and Cytogenetics in Oncology and Haematology


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UIMC1 (ubiquitin interaction motif containing 1)

Identity

Alias (NCBI)RAP80
X2HRIP110
HGNC (Hugo) UIMC1
HGNC Alias symbRAP80
HGNC Alias namereceptor associated protein 80
LocusID (NCBI) 51720
Atlas_Id 47566
Location 5q35.2  [Link to chromosome band 5q35]
Location_base_pair Starts at 176905005 and ends at 177006442 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LOC100507412 (-)::UIMC1 (5q35.2)TXNRD1 (12q23.3)::UIMC1 (5q35.2)UIMC1 (5q35.2)::MALAT1 (11q13.1)
UIMC1 (5q35.2)::NSD1 (5q35.2)UIMC1 (5q35.2)::PMM2 (16p13.2)UIMC1 (5q35.2)::PTPRO (12p12.3)
UIMC1 5q35.2::PMM2 16p13.2UIMC1 5q35.2::PTPRO 12p12.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)UIMC1   30298
Cards
Entrez_Gene (NCBI)UIMC1    ubiquitin interaction motif containing 1
AliasesRAP80; X2HRIP110
GeneCards (Weizmann)UIMC1
Ensembl hg19 (Hinxton)ENSG00000087206 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000087206 [Gene_View]  ENSG00000087206 [Sequence]  chr5:176905005-177006442 [Contig_View]  UIMC1 [Vega]
ICGC DataPortalENSG00000087206
TCGA cBioPortalUIMC1
AceView (NCBI)UIMC1
Genatlas (Paris)UIMC1
SOURCE (Princeton)UIMC1
Genetics Home Reference (NIH)UIMC1
Genomic and cartography
GoldenPath hg38 (UCSC)UIMC1  -     chr5:176905005-177006442 -  5q35.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UIMC1  -     5q35.2   [Description]    (hg19-Feb_2009)
GoldenPathUIMC1 - 5q35.2 [CytoView hg19]  UIMC1 - 5q35.2 [CytoView hg38]
ImmunoBaseENSG00000087206
Genome Data Viewer NCBIUIMC1 [Mapview hg19]  
OMIM609433   
Gene and transcription
Genbank (Entrez)AF113538 AF349313 AK023044 AK304794 AL137375
RefSeq transcript (Entrez)NM_001199297 NM_001199298 NM_001317961 NM_016290
Consensus coding sequences : CCDS (NCBI)UIMC1
Gene ExpressionUIMC1 [ NCBI-GEO ]   UIMC1 [ EBI - ARRAY_EXPRESS ]   UIMC1 [ SEEK ]   UIMC1 [ MEM ]
Gene Expression Viewer (FireBrowse)UIMC1 [ Firebrowse - Broad ]
GenevisibleExpression of UIMC1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51720
GTEX Portal (Tissue expression)UIMC1
Human Protein AtlasENSG00000087206-UIMC1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UIMC1
Human Protein Atlas [tissue]ENSG00000087206-UIMC1 [tissue]
HPRD11482
Protein Interaction databases
BioGRIDUIMC1
STRING (EMBL)UIMC1
ZODIACUIMC1
Ontologies - Pathways
Litterature
PubMed123 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXUIMC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:05:29 CET 2022

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