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ULBP2 (UL16 binding protein 2)

Identity

Alias_symbol (synonym)RAET1H
Other aliasALCAN-alpha
N2DL2
NKG2DL2
HGNC (Hugo) ULBP2
LocusID (NCBI) 80328
Atlas_Id 49898
Location 6q25.1  [Link to chromosome band 6q25]
Location_base_pair Starts at 150263074 and ends at 150270368 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
LRP11 (6q25.1) / ULBP2 (6q25.1)LRP11 6q25.1 / ULBP2 6q25.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ULBP2   14894
Cards
Entrez_Gene (NCBI)ULBP2  80328  UL16 binding protein 2
AliasesALCAN-alpha; N2DL2; NKG2DL2; RAET1H
GeneCards (Weizmann)ULBP2
Ensembl hg19 (Hinxton)ENSG00000131015 [Gene_View]  chr6:150263074-150270368 [Contig_View]  ULBP2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000131015 [Gene_View]  chr6:150263074-150270368 [Contig_View]  ULBP2 [Vega]
ICGC DataPortalENSG00000131015
TCGA cBioPortalULBP2
AceView (NCBI)ULBP2
Genatlas (Paris)ULBP2
WikiGenes80328
SOURCE (Princeton)ULBP2
Genetics Home Reference (NIH)ULBP2
Genomic and cartography
GoldenPath hg19 (UCSC)ULBP2  -     chr6:150263074-150270368 +  6q25.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ULBP2  -     6q25.1   [Description]    (hg38-Dec_2013)
EnsemblULBP2 - 6q25.1 [CytoView hg19]  ULBP2 - 6q25.1 [CytoView hg38]
Mapping of homologs : NCBIULBP2 [Mapview hg19]  ULBP2 [Mapview hg38]
OMIM605698   
Gene and transcription
Genbank (Entrez)AB052906 AF304378 AF321606 AK299895 AX772820
RefSeq transcript (Entrez)NM_025217
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_025741 NW_004929328
Consensus coding sequences : CCDS (NCBI)ULBP2
Cluster EST : UnigeneHs.656778 [ NCBI ]
CGAP (NCI)Hs.656778
Alternative Splicing GalleryENSG00000131015
Gene ExpressionULBP2 [ NCBI-GEO ]   ULBP2 [ EBI - ARRAY_EXPRESS ]   ULBP2 [ SEEK ]   ULBP2 [ MEM ]
Gene Expression Viewer (FireBrowse)ULBP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80328
GTEX Portal (Tissue expression)ULBP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BZM5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BZM5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BZM5
Splice isoforms : SwissVarQ9BZM5
PhosPhoSitePlusQ9BZM5
Domains : Interpro (EBI)MHC_I-like_Ag-recog    MHC_I/II-like_Ag-recog    MHC_I_a_a1/a2   
Domain families : Pfam (Sanger)MHC_I (PF00129)   
Domain families : Pfam (NCBI)pfam00129   
Conserved Domain (NCBI)ULBP2
DMDM Disease mutations80328
Blocks (Seattle)ULBP2
SuperfamilyQ9BZM5
Human Protein AtlasENSG00000131015
Peptide AtlasQ9BZM5
HPRD16143
IPIIPI00018860   IPI00909250   
Protein Interaction databases
DIP (DOE-UCLA)Q9BZM5
IntAct (EBI)Q9BZM5
FunCoupENSG00000131015
BioGRIDULBP2
STRING (EMBL)ULBP2
ZODIACULBP2
Ontologies - Pathways
QuickGOQ9BZM5
Ontology : AmiGOantigen binding  extracellular space  cell surface  antigen processing and presentation  natural killer cell activation  natural killer cell mediated cytotoxicity  anchored component of plasma membrane  natural killer cell lectin-like receptor binding  
Ontology : EGO-EBIantigen binding  extracellular space  cell surface  antigen processing and presentation  natural killer cell activation  natural killer cell mediated cytotoxicity  anchored component of plasma membrane  natural killer cell lectin-like receptor binding  
Pathways : KEGGNatural killer cell mediated cytotoxicity   
NDEx NetworkULBP2
Atlas of Cancer Signalling NetworkULBP2
Wikipedia pathwaysULBP2
Orthology - Evolution
OrthoDB80328
GeneTree (enSembl)ENSG00000131015
Phylogenetic Trees/Animal Genes : TreeFamULBP2
HOVERGENQ9BZM5
HOGENOMQ9BZM5
Homologs : HomoloGeneULBP2
Homology/Alignments : Family Browser (UCSC)ULBP2
Gene fusions - Rearrangements
Fusion : MitelmanLRP11/ULBP2 [6q25.1/6q25.1]  [t(6;6)(q25;q25)]  
Fusion: TCGALRP11 6q25.1 ULBP2 6q25.1 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerULBP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ULBP2
dbVarULBP2
ClinVarULBP2
1000_GenomesULBP2 
Exome Variant ServerULBP2
ExAC (Exome Aggregation Consortium)ULBP2 (select the gene name)
Genetic variants : HAPMAP80328
Genomic Variants (DGV)ULBP2 [DGVbeta]
DECIPHER (Syndromes)6:150263074-150270368  ENSG00000131015
CONAN: Copy Number AnalysisULBP2 
Mutations
ICGC Data PortalULBP2 
TCGA Data PortalULBP2 
Broad Tumor PortalULBP2
OASIS PortalULBP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICULBP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDULBP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ULBP2
DgiDB (Drug Gene Interaction Database)ULBP2
DoCM (Curated mutations)ULBP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ULBP2 (select a term)
intoGenULBP2
Cancer3DULBP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605698   
Orphanet
MedgenULBP2
Genetic Testing Registry ULBP2
NextProtQ9BZM5 [Medical]
TSGene80328
GENETestsULBP2
Huge Navigator ULBP2 [HugePedia]
snp3D : Map Gene to Disease80328
BioCentury BCIQULBP2
ClinGenULBP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80328
Chemical/Pharm GKB GenePA37916
Clinical trialULBP2
Miscellaneous
canSAR (ICR)ULBP2 (select the gene name)
Probes
Litterature
PubMed61 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineULBP2
EVEXULBP2
GoPubMedULBP2
iHOPULBP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:33:24 CET 2017

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