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ULBP2 (UL16 binding protein 2)

Identity

Alias (NCBI)ALCAN-alpha
N2DL2
NKG2DL2
RAET1H
RAET1L
HGNC (Hugo) ULBP2
HGNC Alias symbRAET1H
LocusID (NCBI) 80328
Atlas_Id 49898
Location 6q25.1  [Link to chromosome band 6q25]
Location_base_pair Starts at 149942014 and ends at 149949232 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LRP11 (6q25.1) / ULBP2 (6q25.1)LRP11 6q25.1 / ULBP2 6q25.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ULBP2   14894
Cards
Entrez_Gene (NCBI)ULBP2    UL16 binding protein 2
AliasesALCAN-alpha; N2DL2; NKG2DL2; RAET1H; 
RAET1L
GeneCards (Weizmann)ULBP2
Ensembl hg19 (Hinxton)ENSG00000131015 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000131015 [Gene_View]  ENSG00000131015 [Sequence]  chr6:149942014-149949232 [Contig_View]  ULBP2 [Vega]
ICGC DataPortalENSG00000131015
TCGA cBioPortalULBP2
AceView (NCBI)ULBP2
Genatlas (Paris)ULBP2
SOURCE (Princeton)ULBP2
Genetics Home Reference (NIH)ULBP2
Genomic and cartography
GoldenPath hg38 (UCSC)ULBP2  -     chr6:149942014-149949232 +  6q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ULBP2  -     6q25.1   [Description]    (hg19-Feb_2009)
GoldenPathULBP2 - 6q25.1 [CytoView hg19]  ULBP2 - 6q25.1 [CytoView hg38]
ImmunoBaseENSG00000131015
Genome Data Viewer NCBIULBP2 [Mapview hg19]  
OMIM605698   
Gene and transcription
Genbank (Entrez)AB052906 AF304378 AF321606 AK299895 AX772820
RefSeq transcript (Entrez)NM_025217
Consensus coding sequences : CCDS (NCBI)ULBP2
Gene ExpressionULBP2 [ NCBI-GEO ]   ULBP2 [ EBI - ARRAY_EXPRESS ]   ULBP2 [ SEEK ]   ULBP2 [ MEM ]
Gene Expression Viewer (FireBrowse)ULBP2 [ Firebrowse - Broad ]
GenevisibleExpression of ULBP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80328
GTEX Portal (Tissue expression)ULBP2
Human Protein AtlasENSG00000131015-ULBP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BZM5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BZM5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BZM5
PhosPhoSitePlusQ9BZM5
Domains : Interpro (EBI)MHC_I-like_Ag-recog    MHC_I-like_Ag-recog_sf    MHC_I/II-like_Ag-recog   
Domain families : Pfam (Sanger)MHC_I (PF00129)   
Domain families : Pfam (NCBI)pfam00129   
Conserved Domain (NCBI)ULBP2
SuperfamilyQ9BZM5
AlphaFold pdb e-kbQ9BZM5   
Human Protein Atlas [tissue]ENSG00000131015-ULBP2 [tissue]
HPRD16143
Protein Interaction databases
DIP (DOE-UCLA)Q9BZM5
IntAct (EBI)Q9BZM5
BioGRIDULBP2
STRING (EMBL)ULBP2
ZODIACULBP2
Ontologies - Pathways
QuickGOQ9BZM5
Ontology : AmiGOprotein binding  extracellular region  extracellular space  extracellular space  endoplasmic reticulum  plasma membrane  immune response  external side of plasma membrane  cell surface  natural killer cell activation  natural killer cell mediated cytotoxicity  anchored component of plasma membrane  natural killer cell lectin-like receptor binding  
Ontology : EGO-EBIprotein binding  extracellular region  extracellular space  extracellular space  endoplasmic reticulum  plasma membrane  immune response  external side of plasma membrane  cell surface  natural killer cell activation  natural killer cell mediated cytotoxicity  anchored component of plasma membrane  natural killer cell lectin-like receptor binding  
Pathways : KEGGNatural killer cell mediated cytotoxicity   
NDEx NetworkULBP2
Atlas of Cancer Signalling NetworkULBP2
Wikipedia pathwaysULBP2
Orthology - Evolution
OrthoDB80328
GeneTree (enSembl)ENSG00000131015
Phylogenetic Trees/Animal Genes : TreeFamULBP2
Homologs : HomoloGeneULBP2
Homology/Alignments : Family Browser (UCSC)ULBP2
Gene fusions - Rearrangements
Fusion : MitelmanLRP11/ULBP2 [6q25.1/6q25.1]  
Fusion : QuiverULBP2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerULBP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ULBP2
dbVarULBP2
ClinVarULBP2
MonarchULBP2
1000_GenomesULBP2 
Exome Variant ServerULBP2
GNOMAD BrowserENSG00000131015
Varsome BrowserULBP2
ACMGULBP2 variants
VarityQ9BZM5
Genomic Variants (DGV)ULBP2 [DGVbeta]
DECIPHERULBP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisULBP2 
Mutations
ICGC Data PortalULBP2 
TCGA Data PortalULBP2 
Broad Tumor PortalULBP2
OASIS PortalULBP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICULBP2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DULBP2
Mutations and Diseases : HGMDULBP2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaULBP2
DgiDB (Drug Gene Interaction Database)ULBP2
DoCM (Curated mutations)ULBP2
CIViC (Clinical Interpretations of Variants in Cancer)ULBP2
Cancer3DULBP2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605698   
Orphanet
DisGeNETULBP2
MedgenULBP2
Genetic Testing Registry ULBP2
NextProtQ9BZM5 [Medical]
GENETestsULBP2
Target ValidationULBP2
Huge Navigator ULBP2 [HugePedia]
ClinGenULBP2
Clinical trials, drugs, therapy
MyCancerGenomeULBP2
Protein Interactions : CTDULBP2
Pharm GKB GenePA37916
PharosQ9BZM5
Clinical trialULBP2
Miscellaneous
canSAR (ICR)ULBP2
HarmonizomeULBP2
DataMed IndexULBP2
Probes
Litterature
PubMed77 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXULBP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:37:25 CEST 2021

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