Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

UMAD1 (UBAP1-MVB12-associated (UMA) domain containing 1)

Identity

Alias_namesRPA3-AS1
RPA3OS
RPA3 antisense RNA 1
RPA3 opposite strand
Other alias
HGNC (Hugo) UMAD1
LocusID (NCBI) 729852
Atlas_Id 75479
Location 7p21.3  [Link to chromosome band 7p21]
Location_base_pair Starts at 7680267 and ends at 7918851 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UMAD1   48955
Cards
Entrez_Gene (NCBI)UMAD1  729852  UBAP1-MVB12-associated (UMA) domain containing 1
AliasesRPA3-AS1; RPA3OS
GeneCards (Weizmann)UMAD1
Ensembl hg19 (Hinxton) [Gene_View]  chr7:7680267-7918851 [Contig_View]  UMAD1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:7680267-7918851 [Contig_View]  UMAD1 [Vega]
TCGA cBioPortalUMAD1
AceView (NCBI)UMAD1
Genatlas (Paris)UMAD1
WikiGenes729852
SOURCE (Princeton)UMAD1
Genetics Home Reference (NIH)UMAD1
Genomic and cartography
GoldenPath hg19 (UCSC)UMAD1  -     chr7:7680267-7918851 +  7p21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)UMAD1  -     7p21.3   [Description]    (hg38-Dec_2013)
EnsemblUMAD1 - 7p21.3 [CytoView hg19]  UMAD1 - 7p21.3 [CytoView hg38]
Mapping of homologs : NCBIUMAD1 [Mapview hg19]  UMAD1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI565121 AK027125 AK295253 DA576342 DA678734
RefSeq transcript (Entrez)NM_001302348 NM_001302349 NM_001302350
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)UMAD1
Cluster EST : UnigeneHs.652371 [ NCBI ]
CGAP (NCI)Hs.652371
Gene ExpressionUMAD1 [ NCBI-GEO ]   UMAD1 [ EBI - ARRAY_EXPRESS ]   UMAD1 [ SEEK ]   UMAD1 [ MEM ]
Gene Expression Viewer (FireBrowse)UMAD1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)729852
GTEX Portal (Tissue expression)UMAD1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UMAD1
DMDM Disease mutations729852
Blocks (Seattle)UMAD1
IPIIPI00401151   
Protein Interaction databases
BioGRIDUMAD1
STRING (EMBL)UMAD1
ZODIACUMAD1
Ontologies - Pathways
Huge Navigator UMAD1 [HugePedia]
snp3D : Map Gene to Disease729852
BioCentury BCIQUMAD1
ClinGenUMAD1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729852
Clinical trialUMAD1
Miscellaneous
canSAR (ICR)UMAD1 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUMAD1
EVEXUMAD1
GoPubMedUMAD1
iHOPUMAD1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:50:48 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.