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UMODL1-AS1 (UMODL1 antisense RNA 1)

Identity

Alias_namesC21orf128
chromosome 21 open reading frame 128
Alias_symbol (synonym)FLJ33471
Other alias
HGNC (Hugo) UMODL1-AS1
LocusID (NCBI) 150147
Atlas_Id 75481
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 42102134 and ends at 42108448 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UMODL1-AS1   23821
Cards
Entrez_Gene (NCBI)UMODL1-AS1  150147  UMODL1 antisense RNA 1
AliasesC21orf128
GeneCards (Weizmann)UMODL1-AS1
Ensembl hg19 (Hinxton)ENSG00000184385 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184385 [Gene_View]  chr21:42102134-42108448 [Contig_View]  UMODL1-AS1 [Vega]
ICGC DataPortalENSG00000184385
TCGA cBioPortalUMODL1-AS1
AceView (NCBI)UMODL1-AS1
Genatlas (Paris)UMODL1-AS1
WikiGenes150147
SOURCE (Princeton)UMODL1-AS1
Genetics Home Reference (NIH)UMODL1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)UMODL1-AS1  -     chr21:42102134-42108448 -  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UMODL1-AS1  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblUMODL1-AS1 - 21q22.3 [CytoView hg19]  UMODL1-AS1 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBIUMODL1-AS1 [Mapview hg19]  UMODL1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090790 BC063412
RefSeq transcript (Entrez)NM_152507
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UMODL1-AS1
Cluster EST : UnigeneHs.558646 [ NCBI ]
CGAP (NCI)Hs.558646
Alternative Splicing GalleryENSG00000184385
Gene ExpressionUMODL1-AS1 [ NCBI-GEO ]   UMODL1-AS1 [ EBI - ARRAY_EXPRESS ]   UMODL1-AS1 [ SEEK ]   UMODL1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)UMODL1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)150147
GTEX Portal (Tissue expression)UMODL1-AS1
Human Protein AtlasENSG00000184385-UMODL1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N2C9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N2C9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N2C9
Splice isoforms : SwissVarQ8N2C9
PhosPhoSitePlusQ8N2C9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UMODL1-AS1
DMDM Disease mutations150147
Blocks (Seattle)UMODL1-AS1
SuperfamilyQ8N2C9
Human Protein Atlas [tissue]ENSG00000184385-UMODL1-AS1 [tissue]
Peptide AtlasQ8N2C9
HPRD10740
IPIIPI00166380   
Protein Interaction databases
DIP (DOE-UCLA)Q8N2C9
IntAct (EBI)Q8N2C9
FunCoupENSG00000184385
BioGRIDUMODL1-AS1
STRING (EMBL)UMODL1-AS1
ZODIACUMODL1-AS1
Ontologies - Pathways
QuickGOQ8N2C9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkUMODL1-AS1
Atlas of Cancer Signalling NetworkUMODL1-AS1
Wikipedia pathwaysUMODL1-AS1
Orthology - Evolution
OrthoDB150147
GeneTree (enSembl)ENSG00000184385
Phylogenetic Trees/Animal Genes : TreeFamUMODL1-AS1
HOVERGENQ8N2C9
HOGENOMQ8N2C9
Homologs : HomoloGeneUMODL1-AS1
Homology/Alignments : Family Browser (UCSC)UMODL1-AS1
Gene fusions - Rearrangements
Tumor Fusion PortalUMODL1-AS1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUMODL1-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UMODL1-AS1
dbVarUMODL1-AS1
ClinVarUMODL1-AS1
1000_GenomesUMODL1-AS1 
Exome Variant ServerUMODL1-AS1
ExAC (Exome Aggregation Consortium)ENSG00000184385
GNOMAD BrowserENSG00000184385
Genetic variants : HAPMAP150147
Genomic Variants (DGV)UMODL1-AS1 [DGVbeta]
DECIPHERUMODL1-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUMODL1-AS1 
Mutations
ICGC Data PortalUMODL1-AS1 
TCGA Data PortalUMODL1-AS1 
Broad Tumor PortalUMODL1-AS1
OASIS PortalUMODL1-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDUMODL1-AS1
BioMutasearch UMODL1-AS1
DgiDB (Drug Gene Interaction Database)UMODL1-AS1
DoCM (Curated mutations)UMODL1-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UMODL1-AS1 (select a term)
intoGenUMODL1-AS1
Cancer3DUMODL1-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETUMODL1-AS1
MedgenUMODL1-AS1
Genetic Testing Registry UMODL1-AS1
NextProtQ8N2C9 [Medical]
TSGene150147
GENETestsUMODL1-AS1
Target ValidationUMODL1-AS1
Huge Navigator UMODL1-AS1 [HugePedia]
snp3D : Map Gene to Disease150147
BioCentury BCIQUMODL1-AS1
ClinGenUMODL1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD150147
Chemical/Pharm GKB GenePA134960617
Clinical trialUMODL1-AS1
Miscellaneous
canSAR (ICR)UMODL1-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUMODL1-AS1
EVEXUMODL1-AS1
GoPubMedUMODL1-AS1
iHOPUMODL1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:43:21 CET 2017

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