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UNC119B (unc-119 lipid binding chaperone B)

Identity

Alias_namesunc119 (C.elegans) homolog B
unc-119 homolog B (C. elegans)
Alias_symbol (synonym)MGC5139
POC7B
Other alias
HGNC (Hugo) UNC119B
LocusID (NCBI) 84747
Atlas_Id 75482
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 120710435 and ends at 120723640 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
UNC119B (12q24.31) / UNC119B (12q24.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UNC119B   16488
Cards
Entrez_Gene (NCBI)UNC119B  84747  unc-119 lipid binding chaperone B
AliasesPOC7B
GeneCards (Weizmann)UNC119B
Ensembl hg19 (Hinxton)ENSG00000175970 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175970 [Gene_View]  chr12:120710435-120723640 [Contig_View]  UNC119B [Vega]
ICGC DataPortalENSG00000175970
TCGA cBioPortalUNC119B
AceView (NCBI)UNC119B
Genatlas (Paris)UNC119B
WikiGenes84747
SOURCE (Princeton)UNC119B
Genetics Home Reference (NIH)UNC119B
Genomic and cartography
GoldenPath hg38 (UCSC)UNC119B  -     chr12:120710435-120723640 +  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UNC119B  -     12q24.31   [Description]    (hg19-Feb_2009)
EnsemblUNC119B - 12q24.31 [CytoView hg19]  UNC119B - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIUNC119B [Mapview hg19]  UNC119B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057021 AK126367 AL137327 BC004815 BC070088
RefSeq transcript (Entrez)NM_001080533 NM_032661
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UNC119B
Cluster EST : UnigeneHs.127610 [ NCBI ]
CGAP (NCI)Hs.127610
Alternative Splicing GalleryENSG00000175970
Gene ExpressionUNC119B [ NCBI-GEO ]   UNC119B [ EBI - ARRAY_EXPRESS ]   UNC119B [ SEEK ]   UNC119B [ MEM ]
Gene Expression Viewer (FireBrowse)UNC119B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84747
GTEX Portal (Tissue expression)UNC119B
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NIH7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NIH7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NIH7
Splice isoforms : SwissVarA6NIH7
PhosPhoSitePlusA6NIH7
Domains : Interpro (EBI)Ig_E-set    PDED_dom   
Domain families : Pfam (Sanger)GMP_PDE_delta (PF05351)   
Domain families : Pfam (NCBI)pfam05351   
Conserved Domain (NCBI)UNC119B
DMDM Disease mutations84747
Blocks (Seattle)UNC119B
SuperfamilyA6NIH7
Human Protein AtlasENSG00000175970
Peptide AtlasA6NIH7
IPIIPI00414629   IPI00465417   IPI00013367   
Protein Interaction databases
DIP (DOE-UCLA)A6NIH7
IntAct (EBI)A6NIH7
FunCoupENSG00000175970
BioGRIDUNC119B
STRING (EMBL)UNC119B
ZODIACUNC119B
Ontologies - Pathways
QuickGOA6NIH7
Ontology : AmiGOprotein binding  intracellular  cytosol  cilium  lipid binding  neuron differentiation  ciliary transition zone  lipoprotein transport  cilium assembly  
Ontology : EGO-EBIprotein binding  intracellular  cytosol  cilium  lipid binding  neuron differentiation  ciliary transition zone  lipoprotein transport  cilium assembly  
NDEx NetworkUNC119B
Atlas of Cancer Signalling NetworkUNC119B
Wikipedia pathwaysUNC119B
Orthology - Evolution
OrthoDB84747
GeneTree (enSembl)ENSG00000175970
Phylogenetic Trees/Animal Genes : TreeFamUNC119B
HOVERGENA6NIH7
HOGENOMA6NIH7
Homologs : HomoloGeneUNC119B
Homology/Alignments : Family Browser (UCSC)UNC119B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUNC119B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UNC119B
dbVarUNC119B
ClinVarUNC119B
1000_GenomesUNC119B 
Exome Variant ServerUNC119B
ExAC (Exome Aggregation Consortium)UNC119B (select the gene name)
Genetic variants : HAPMAP84747
Genomic Variants (DGV)UNC119B [DGVbeta]
DECIPHERUNC119B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUNC119B 
Mutations
ICGC Data PortalUNC119B 
TCGA Data PortalUNC119B 
Broad Tumor PortalUNC119B
OASIS PortalUNC119B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUNC119B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUNC119B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UNC119B
DgiDB (Drug Gene Interaction Database)UNC119B
DoCM (Curated mutations)UNC119B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UNC119B (select a term)
intoGenUNC119B
Cancer3DUNC119B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenUNC119B
Genetic Testing Registry UNC119B
NextProtA6NIH7 [Medical]
TSGene84747
GENETestsUNC119B
Huge Navigator UNC119B [HugePedia]
snp3D : Map Gene to Disease84747
BioCentury BCIQUNC119B
ClinGenUNC119B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84747
Chemical/Pharm GKB GenePA38152
Clinical trialUNC119B
Miscellaneous
canSAR (ICR)UNC119B (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUNC119B
EVEXUNC119B
GoPubMedUNC119B
iHOPUNC119B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:00:44 CEST 2017

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