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UNC80 (unc-80 homolog, NALCN activator)

Identity

Alias_namesC2orf21
chromosome 2 open reading frame 21
unc-80 homolog (C. elegans)
Alias_symbol (synonym)FLJ33496
KIAA1843
UNC-80
Other alias
HGNC (Hugo) UNC80
LocusID (NCBI) 285175
Atlas_Id 75489
Location 2q34  [Link to chromosome band 2q34]
Location_base_pair Starts at 209771993 and ends at 209999300 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
UNC80 (2q34) / ITPKB (1q42.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UNC80   26582
Cards
Entrez_Gene (NCBI)UNC80  285175  unc-80 homolog, NALCN activator
AliasesC2orf21; UNC-80
GeneCards (Weizmann)UNC80
Ensembl hg19 (Hinxton)ENSG00000144406 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144406 [Gene_View]  chr2:209771993-209999300 [Contig_View]  UNC80 [Vega]
ICGC DataPortalENSG00000144406
TCGA cBioPortalUNC80
AceView (NCBI)UNC80
Genatlas (Paris)UNC80
WikiGenes285175
SOURCE (Princeton)UNC80
Genetics Home Reference (NIH)UNC80
Genomic and cartography
GoldenPath hg38 (UCSC)UNC80  -     chr2:209771993-209999300 +  2q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UNC80  -     2q34   [Description]    (hg19-Feb_2009)
EnsemblUNC80 - 2q34 [CytoView hg19]  UNC80 - 2q34 [CytoView hg38]
Mapping of homologs : NCBIUNC80 [Mapview hg19]  UNC80 [Mapview hg38]
OMIM612636   616801   
Gene and transcription
Genbank (Entrez)AB058746 AK027583 AK090815 AK299022 AK302830
RefSeq transcript (Entrez)NM_032504 NM_182587
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UNC80
Cluster EST : UnigeneHs.396201 [ NCBI ]
CGAP (NCI)Hs.396201
Alternative Splicing GalleryENSG00000144406
Gene ExpressionUNC80 [ NCBI-GEO ]   UNC80 [ EBI - ARRAY_EXPRESS ]   UNC80 [ SEEK ]   UNC80 [ MEM ]
Gene Expression Viewer (FireBrowse)UNC80 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285175
GTEX Portal (Tissue expression)UNC80
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N2C7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N2C7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N2C7
Splice isoforms : SwissVarQ8N2C7
PhosPhoSitePlusQ8N2C7
Domains : Interpro (EBI)UNC80_N   
Domain families : Pfam (Sanger)UNC80 (PF15778)   
Domain families : Pfam (NCBI)pfam15778   
Conserved Domain (NCBI)UNC80
DMDM Disease mutations285175
Blocks (Seattle)UNC80
SuperfamilyQ8N2C7
Human Protein AtlasENSG00000144406
Peptide AtlasQ8N2C7
HPRD12809
IPIIPI00385761   IPI00166378   IPI00923519   IPI00910036   IPI00923552   IPI00923533   
Protein Interaction databases
DIP (DOE-UCLA)Q8N2C7
IntAct (EBI)Q8N2C7
FunCoupENSG00000144406
BioGRIDUNC80
STRING (EMBL)UNC80
ZODIACUNC80
Ontologies - Pathways
QuickGOQ8N2C7
Ontology : AmiGOplasma membrane  integral component of membrane  ion transmembrane transport  
Ontology : EGO-EBIplasma membrane  integral component of membrane  ion transmembrane transport  
NDEx NetworkUNC80
Atlas of Cancer Signalling NetworkUNC80
Wikipedia pathwaysUNC80
Orthology - Evolution
OrthoDB285175
GeneTree (enSembl)ENSG00000144406
Phylogenetic Trees/Animal Genes : TreeFamUNC80
HOVERGENQ8N2C7
HOGENOMQ8N2C7
Homologs : HomoloGeneUNC80
Homology/Alignments : Family Browser (UCSC)UNC80
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUNC80 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UNC80
dbVarUNC80
ClinVarUNC80
1000_GenomesUNC80 
Exome Variant ServerUNC80
ExAC (Exome Aggregation Consortium)UNC80 (select the gene name)
Genetic variants : HAPMAP285175
Genomic Variants (DGV)UNC80 [DGVbeta]
DECIPHERUNC80 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUNC80 
Mutations
ICGC Data PortalUNC80 
TCGA Data PortalUNC80 
Broad Tumor PortalUNC80
OASIS PortalUNC80 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUNC80  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUNC80
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UNC80
DgiDB (Drug Gene Interaction Database)UNC80
DoCM (Curated mutations)UNC80 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UNC80 (select a term)
intoGenUNC80
Cancer3DUNC80(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612636    616801   
Orphanet22538   
MedgenUNC80
Genetic Testing Registry UNC80
NextProtQ8N2C7 [Medical]
TSGene285175
GENETestsUNC80
Target ValidationUNC80
Huge Navigator UNC80 [HugePedia]
snp3D : Map Gene to Disease285175
BioCentury BCIQUNC80
ClinGenUNC80
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285175
Chemical/Pharm GKB GenePA165697705
Clinical trialUNC80
Miscellaneous
canSAR (ICR)UNC80 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUNC80
EVEXUNC80
GoPubMedUNC80
iHOPUNC80
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:43:17 CEST 2017

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