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UNG (uracil-DNA glycosylase)

Identity

Other namesDGU
HIGM4
HIGM5
UDG
UNG1
UNG15
UNG2
HGNC (Hugo) UNG
LocusID (NCBI) 7374
Location 12q24.11
Location_base_pair Starts at 109535923 and ends at 109548798 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)UNG   12572
Entrez_Gene (NCBI)UNG  7374  uracil-DNA glycosylase
Cards
GeneCards (Weizmann)UNG
Ensembl (Hinxton)ENSG00000076248 [Gene_View]  chr12:109535923-109548798 [Contig_View]  UNG [Vega]
AceView (NCBI)UNG
Genatlas (Paris)UNG
SOURCE (Stanford)NM_003362 NM_080911
Genomic and cartography
GoldenPath (UCSC)UNG  -  12q24.11   chr12:109535923-109548798 +  12q24.11   [Description]    (hg19-Feb_2009)
EnsemblUNG - 12q24.11 [CytoView]
Mapping of homologs : NCBIUNG [Mapview]
OMIM191525   608106   
Gene and transcription
Genbank (Entrez)AK291341 AK299416 AK313552 BC015205 BC050634
RefSeq transcript (SRS)NM_003362 NM_080911
RefSeq transcript (Entrez)NM_003362 NM_080911
RefSeq genomic (SRS)AC_000144 NC_000012 NC_018923 NG_007284 NT_009775 NW_001838062 NW_004078075
RefSeq genomic (Entrez)AC_000144 NC_000012 NC_018923 NG_007284 NT_009775 NW_001838062 NW_004078075
Consensus coding sequences : CCDS (NCBI)UNG
Cluster EST : UnigeneHs.191334 [ SRS ] Hs.191334 [ NCBI ]
CGAP (NCI)Hs.191334
Alternative Splicing : Fast-db (Paris)GSHG0006987
Alternative Splicing GalleryENSG00000076248
Gene ExpressionUNG [ NCBI-GEO ]   UNG [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP13051 (SRS) P13051 (Uniprot)
NextProtP13051
With graphics : InterProP13051
Splice isoforms : SwissVarP13051(Swissvar)
Domaine pattern : Prosite (SRS)U_DNA_GLYCOSYLASE (PS00130)   
Domaine pattern : Prosite (Expaxy)U_DNA_GLYCOSYLASE (PS00130)   
Domains : Interpro (SRS)Ura-DNA_Glyclase_AS    Ura_DNA_glycsylse    Uracil-DNA_glycosylase-like   
Domains : Interpro (EBI)Ura-DNA_Glyclase_AS    Ura_DNA_glycsylse    Uracil-DNA_glycosylase-like   
Related proteins : CluSTrP13051
Domain families : Pfam (SRS)UDG (PF03167)   
Domain families : Pfam (Sanger)UDG (PF03167)   
Domain families : Pfam (NCBI)pfam03167   
Domain families : Smart (EMBL)UDG (SM00986)  
DMDM7374
Blocks (Seattle)P13051
PDB (SRS)1AKZ    1DPU    1EMH    1EMJ    1Q3F    1SSP    1UGH    1YUO    2HXM    2OXM    2OYT    2SSP    3FCF    3FCI    3FCK    3FCL    3TKB    4SKN   
PDB (PDBSum)1AKZ    1DPU    1EMH    1EMJ    1Q3F    1SSP    1UGH    1YUO    2HXM    2OXM    2OYT    2SSP    3FCF    3FCI    3FCK    3FCL    3TKB    4SKN   
PDB (IMB)1AKZ    1DPU    1EMH    1EMJ    1Q3F    1SSP    1UGH    1YUO    2HXM    2OXM    2OYT    2SSP    3FCF    3FCI    3FCK    3FCL    3TKB    4SKN   
PDB (RSDB)1AKZ    1DPU    1EMH    1EMJ    1Q3F    1SSP    1UGH    1YUO    2HXM    2OXM    2OYT    2SSP    3FCF    3FCI    3FCK    3FCL    3TKB    4SKN   
Human Protein AtlasENSG00000076248
HPRD01881
IPIIPI00011069   IPI00006516   IPI00909037   IPI01012179   IPI01010925   IPI01011729   
Protein Interaction databases
DIP (DOE-UCLA)P13051
IntAct (EBI)P13051
FunCoupENSG00000076248
REACTOMEUNG
Protein Interaction Database7374
BioGRIDUNG
InParanoidP13051
Interologous Interaction database P13051
IntegromeDBUNG
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)UNG
SNP (GeneSNP Utah)UNG
SNP : HGBaseUNG
Genetic variants : HAPMAPUNG
Somatic Mutations in Cancer : COSMICUNG 
CONAN: Copy Number AnalysisUNG 
Mutations and Diseases : HGMDUNG
OMIM191525    608106   
GENETests191525    608106   
Disease Genetic AssociationUNG
Huge Navigator UNG [HugePedia]  UNG [HugeCancerGEM]
Genomic VariantsUNG  UNG [DGVbeta]
snp3D : Map Gene to Disease7374
General knowledge
Homologs : HomoloGeneUNG
Homology/Alignments : Family Browser (UCSC)UNG
Phylogenetic Trees/Animal Genes : TreeFamUNG
Chemical/Protein Interactions : CTD7374
Chemical/Pharm GKB GenePA364
Clinical trialUNG
Cancer Resource (Charite)ENSG00000076248
Ontology : AmiGOuracil DNA N-glycosylase activity  nucleus  mitochondrion  DNA repair  base-excision repair  somatic hypermutation of immunoglobulin genes  somatic recombination of immunoglobulin gene segments  virus-host interaction  
Ontology : EGO-EBIuracil DNA N-glycosylase activity  nucleus  mitochondrion  DNA repair  base-excision repair  somatic hypermutation of immunoglobulin genes  somatic recombination of immunoglobulin gene segments  virus-host interaction  
Other databases
Probes
Litterature
PubMed126 Pubmed reference(s) in Entrez
PubGeneUNG
iHOPUNG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:24:09 CEST 2013
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