Atlas of Genetics and Cytogenetics in Oncology and Haematology


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UPK3BL1 (uroplakin 3B like 1)

Identity

Alias_namesUPK3BL
uroplakin 3B like
Alias_symbol (synonym)UPLP
Other alias
HGNC (Hugo) UPK3BL1
LocusID (NCBI) 100134938
Atlas_Id 79703
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 102637025 and ends at 102642791 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UPK3BL1   37278
Cards
Entrez_Gene (NCBI)UPK3BL1  100134938  uroplakin 3B like 1
AliasesUPK3BL; UPLP
GeneCards (Weizmann)UPK3BL1
Ensembl hg19 (Hinxton)ENSG00000267368 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267368 [Gene_View]  chr7:102637025-102642791 [Contig_View]  UPK3BL1 [Vega]
ICGC DataPortalENSG00000267368
TCGA cBioPortalUPK3BL1
AceView (NCBI)UPK3BL1
Genatlas (Paris)UPK3BL1
WikiGenes100134938
SOURCE (Princeton)UPK3BL1
Genetics Home Reference (NIH)UPK3BL1
Genomic and cartography
GoldenPath hg38 (UCSC)UPK3BL1  -     chr7:102637025-102642791 -  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UPK3BL1  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblUPK3BL1 - 7q22.1 [CytoView hg19]  UPK3BL1 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBIUPK3BL1 [Mapview hg19]  UPK3BL1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)EU341824 KF150200
RefSeq transcript (Entrez)NM_001114403
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UPK3BL1
Cluster EST : UnigeneHs.610255 [ NCBI ]
CGAP (NCI)Hs.610255
Alternative Splicing GalleryENSG00000267368
Gene ExpressionUPK3BL1 [ NCBI-GEO ]   UPK3BL1 [ EBI - ARRAY_EXPRESS ]   UPK3BL1 [ SEEK ]   UPK3BL1 [ MEM ]
Gene Expression Viewer (FireBrowse)UPK3BL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100134938
GTEX Portal (Tissue expression)UPK3BL1
Human Protein AtlasENSG00000267368-UPK3BL1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UPK3BL1
DMDM Disease mutations100134938
Blocks (Seattle)UPK3BL1
Human Protein Atlas [tissue]ENSG00000267368-UPK3BL1 [tissue]
IPIIPI00514244   
Protein Interaction databases
FunCoupENSG00000267368
BioGRIDUPK3BL1
STRING (EMBL)UPK3BL1
ZODIACUPK3BL1
Ontologies - Pathways
Huge Navigator UPK3BL1 [HugePedia]
snp3D : Map Gene to Disease100134938
BioCentury BCIQUPK3BL1
ClinGenUPK3BL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100134938
Chemical/Pharm GKB GenePA165618441
Clinical trialUPK3BL1
Miscellaneous
canSAR (ICR)UPK3BL1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUPK3BL1
EVEXUPK3BL1
GoPubMedUPK3BL1
iHOPUPK3BL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:17:36 CET 2017

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