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UPRT (uracil phosphoribosyltransferase homolog)

Identity

Alias_namesuracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)
Alias_symbol (synonym)DKFZp781E1243
MGC23937
FUR1
RP11-311P8.3
Other aliasUPP
HGNC (Hugo) UPRT
LocusID (NCBI) 139596
Atlas_Id 51032
Location Xq13.3  [Link to chromosome band Xq13]
Location_base_pair Starts at 75274059 and ends at 75304897 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CTLA4 (2q33.2) / UPRT (Xq13.3)NOD2 (16q12.1) / UPRT (Xq13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UPRT   28334
Cards
Entrez_Gene (NCBI)UPRT  139596  uracil phosphoribosyltransferase homolog
AliasesFUR1; UPP
GeneCards (Weizmann)UPRT
Ensembl hg19 (Hinxton)ENSG00000094841 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000094841 [Gene_View]  chrX:75274059-75304897 [Contig_View]  UPRT [Vega]
ICGC DataPortalENSG00000094841
TCGA cBioPortalUPRT
AceView (NCBI)UPRT
Genatlas (Paris)UPRT
WikiGenes139596
SOURCE (Princeton)UPRT
Genetics Home Reference (NIH)UPRT
Genomic and cartography
GoldenPath hg38 (UCSC)UPRT  -     chrX:75274059-75304897 +  Xq13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UPRT  -     Xq13.3   [Description]    (hg19-Feb_2009)
EnsemblUPRT - Xq13.3 [CytoView hg19]  UPRT - Xq13.3 [CytoView hg38]
Mapping of homologs : NCBIUPRT [Mapview hg19]  UPRT [Mapview hg38]
OMIM300656   
Gene and transcription
Genbank (Entrez)AA974609 AK056354 AK293024 AK309951 AY643714
RefSeq transcript (Entrez)NM_001307944 NM_145052
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UPRT
Cluster EST : UnigeneHs.91612 [ NCBI ]
CGAP (NCI)Hs.91612
Alternative Splicing GalleryENSG00000094841
Gene ExpressionUPRT [ NCBI-GEO ]   UPRT [ EBI - ARRAY_EXPRESS ]   UPRT [ SEEK ]   UPRT [ MEM ]
Gene Expression Viewer (FireBrowse)UPRT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)139596
GTEX Portal (Tissue expression)UPRT
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96BW1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96BW1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96BW1
Splice isoforms : SwissVarQ96BW1
PhosPhoSitePlusQ96BW1
Domains : Interpro (EBI)PRibTrfase_dom    PRTase-like   
Domain families : Pfam (Sanger)UPRTase (PF14681)   
Domain families : Pfam (NCBI)pfam14681   
Conserved Domain (NCBI)UPRT
DMDM Disease mutations139596
Blocks (Seattle)UPRT
SuperfamilyQ96BW1
Human Protein AtlasENSG00000094841
Peptide AtlasQ96BW1
HPRD06640
IPIIPI00642494   IPI00643178   IPI00797517   IPI00952978   IPI00978934   
Protein Interaction databases
DIP (DOE-UCLA)Q96BW1
IntAct (EBI)Q96BW1
FunCoupENSG00000094841
BioGRIDUPRT
STRING (EMBL)UPRT
ZODIACUPRT
Ontologies - Pathways
QuickGOQ96BW1
Ontology : AmiGOuridine kinase activity  protein binding  GTP binding  nucleus  cytosol  pyrimidine nucleobase metabolic process  UMP biosynthetic process  female pregnancy  lactation  response to insulin  pyrimidine nucleoside salvage  
Ontology : EGO-EBIuridine kinase activity  protein binding  GTP binding  nucleus  cytosol  pyrimidine nucleobase metabolic process  UMP biosynthetic process  female pregnancy  lactation  response to insulin  pyrimidine nucleoside salvage  
Pathways : KEGGPyrimidine metabolism   
NDEx NetworkUPRT
Atlas of Cancer Signalling NetworkUPRT
Wikipedia pathwaysUPRT
Orthology - Evolution
OrthoDB139596
GeneTree (enSembl)ENSG00000094841
Phylogenetic Trees/Animal Genes : TreeFamUPRT
HOVERGENQ96BW1
HOGENOMQ96BW1
Homologs : HomoloGeneUPRT
Homology/Alignments : Family Browser (UCSC)UPRT
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUPRT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UPRT
dbVarUPRT
ClinVarUPRT
1000_GenomesUPRT 
Exome Variant ServerUPRT
ExAC (Exome Aggregation Consortium)UPRT (select the gene name)
Genetic variants : HAPMAP139596
Genomic Variants (DGV)UPRT [DGVbeta]
DECIPHERUPRT [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUPRT 
Mutations
ICGC Data PortalUPRT 
TCGA Data PortalUPRT 
Broad Tumor PortalUPRT
OASIS PortalUPRT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUPRT  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUPRT
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch UPRT
DgiDB (Drug Gene Interaction Database)UPRT
DoCM (Curated mutations)UPRT (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UPRT (select a term)
intoGenUPRT
Cancer3DUPRT(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300656   
Orphanet
MedgenUPRT
Genetic Testing Registry UPRT
NextProtQ96BW1 [Medical]
TSGene139596
GENETestsUPRT
Target ValidationUPRT
Huge Navigator UPRT [HugePedia]
snp3D : Map Gene to Disease139596
BioCentury BCIQUPRT
ClinGenUPRT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD139596
Chemical/Pharm GKB GenePA162408652
Clinical trialUPRT
Miscellaneous
canSAR (ICR)UPRT (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUPRT
EVEXUPRT
GoPubMedUPRT
iHOPUPRT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:37:32 CEST 2017

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