Atlas of Genetics and Cytogenetics in Oncology and Haematology


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UQCC2 (ubiquinol-cytochrome c reductase complex assembly factor 2)

Identity

Alias_namesC6orf125
MNF1
chromosome 6 open reading frame 125
mitochondrial nucleoid factor 1
Alias_symbol (synonym)MGC14833
bA6B20.2
M19
Cbp6
Other aliasC6orf126
HGNC (Hugo) UQCC2
LocusID (NCBI) 84300
Atlas_Id 75501
Location 6p21.31  [Link to chromosome band 6p21]
Location_base_pair Starts at 33696761 and ends at 33711751 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UQCC2   21237
Cards
Entrez_Gene (NCBI)UQCC2  84300  ubiquinol-cytochrome c reductase complex assembly factor 2
AliasesC6orf125; C6orf126; Cbp6; M19; 
MNF1; bA6B20.2
GeneCards (Weizmann)UQCC2
Ensembl hg19 (Hinxton)ENSG00000137288 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137288 [Gene_View]  ENSG00000137288 [Sequence]  chr6:33696761-33711751 [Contig_View]  UQCC2 [Vega]
ICGC DataPortalENSG00000137288
TCGA cBioPortalUQCC2
AceView (NCBI)UQCC2
Genatlas (Paris)UQCC2
WikiGenes84300
SOURCE (Princeton)UQCC2
Genetics Home Reference (NIH)UQCC2
Genomic and cartography
GoldenPath hg38 (UCSC)UQCC2  -     chr6:33696761-33711751 -  6p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UQCC2  -     6p21.31   [Description]    (hg19-Feb_2009)
EnsemblUQCC2 - 6p21.31 [CytoView hg19]  UQCC2 - 6p21.31 [CytoView hg38]
Mapping of homologs : NCBIUQCC2 [Mapview hg19]  UQCC2 [Mapview hg38]
OMIM614461   615824   
Gene and transcription
Genbank (Entrez)AF086234 AI688269 AK127468 AK311835 AY568085
RefSeq transcript (Entrez)NM_032340
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UQCC2
Cluster EST : UnigeneHs.745020 [ NCBI ]
CGAP (NCI)Hs.745020
Alternative Splicing GalleryENSG00000137288
Gene ExpressionUQCC2 [ NCBI-GEO ]   UQCC2 [ EBI - ARRAY_EXPRESS ]   UQCC2 [ SEEK ]   UQCC2 [ MEM ]
Gene Expression Viewer (FireBrowse)UQCC2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84300
GTEX Portal (Tissue expression)UQCC2
Human Protein AtlasENSG00000137288-UQCC2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BRT2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BRT2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BRT2
Splice isoforms : SwissVarQ9BRT2
PhosPhoSitePlusQ9BRT2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UQCC2
DMDM Disease mutations84300
Blocks (Seattle)UQCC2
SuperfamilyQ9BRT2
Human Protein Atlas [tissue]ENSG00000137288-UQCC2 [tissue]
Peptide AtlasQ9BRT2
HPRD12847
IPIIPI00031617   IPI00514293   
Protein Interaction databases
DIP (DOE-UCLA)Q9BRT2
IntAct (EBI)Q9BRT2
FunCoupENSG00000137288
BioGRIDUQCC2
STRING (EMBL)UQCC2
ZODIACUQCC2
Ontologies - Pathways
QuickGOQ9BRT2
Ontology : AmiGO###############################################################################################################################################################################################################################################################                          
Ontology : EGO-EBI###############################################################################################################################################################################################################################################################                          
NDEx NetworkUQCC2
Atlas of Cancer Signalling NetworkUQCC2
Wikipedia pathwaysUQCC2
Orthology - Evolution
OrthoDB84300
GeneTree (enSembl)ENSG00000137288
Phylogenetic Trees/Animal Genes : TreeFamUQCC2
HOVERGENQ9BRT2
HOGENOMQ9BRT2
Homologs : HomoloGeneUQCC2
Homology/Alignments : Family Browser (UCSC)UQCC2
Gene fusions - Rearrangements
Fusion : QuiverUQCC2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUQCC2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UQCC2
dbVarUQCC2
ClinVarUQCC2
1000_GenomesUQCC2 
Exome Variant ServerUQCC2
ExAC (Exome Aggregation Consortium)ENSG00000137288
GNOMAD BrowserENSG00000137288
Varsome BrowserUQCC2
Genetic variants : HAPMAP84300
Genomic Variants (DGV)UQCC2 [DGVbeta]
DECIPHERUQCC2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUQCC2 
Mutations
ICGC Data PortalUQCC2 
TCGA Data PortalUQCC2 
Broad Tumor PortalUQCC2
OASIS PortalUQCC2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDUQCC2
BioMutasearch UQCC2
DgiDB (Drug Gene Interaction Database)UQCC2
DoCM (Curated mutations)UQCC2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UQCC2 (select a term)
intoGenUQCC2
Cancer3DUQCC2(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614461    615824   
Orphanet3378   
DisGeNETUQCC2
MedgenUQCC2
Genetic Testing Registry UQCC2
NextProtQ9BRT2 [Medical]
TSGene84300
GENETestsUQCC2
Target ValidationUQCC2
Huge Navigator UQCC2 [HugePedia]
snp3D : Map Gene to Disease84300
BioCentury BCIQUQCC2
ClinGenUQCC2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84300
Chemical/Pharm GKB GenePA134970806
Clinical trialUQCC2
Miscellaneous
canSAR (ICR)UQCC2 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUQCC2
EVEXUQCC2
GoPubMedUQCC2
iHOPUQCC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:37:46 CEST 2018

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