Atlas of Genetics and Cytogenetics in Oncology and Haematology


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UQCRHL (ubiquinol-cytochrome c reductase hinge protein like)

Identity

Other alias-
HGNC (Hugo) UQCRHL
LocusID (NCBI) 440567
Atlas_Id 75507
Location 1p36.21  [Link to chromosome band 1p36]
Location_base_pair Starts at 15807162 and ends at 15807699 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UQCRHL   51714
Cards
Entrez_Gene (NCBI)UQCRHL  440567  ubiquinol-cytochrome c reductase hinge protein like
Aliases
GeneCards (Weizmann)UQCRHL
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:15807162-15807699 [Contig_View]  UQCRHL [Vega]
TCGA cBioPortalUQCRHL
AceView (NCBI)UQCRHL
Genatlas (Paris)UQCRHL
WikiGenes440567
SOURCE (Princeton)UQCRHL
Genetics Home Reference (NIH)UQCRHL
Genomic and cartography
GoldenPath hg38 (UCSC)UQCRHL  -     chr1:15807162-15807699 -  1p36.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UQCRHL  -     1p36.21   [Description]    (hg19-Feb_2009)
EnsemblUQCRHL - 1p36.21 [CytoView hg19]  UQCRHL - 1p36.21 [CytoView hg38]
Mapping of homologs : NCBIUQCRHL [Mapview hg19]  UQCRHL [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001089591
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UQCRHL
Cluster EST : UnigeneHs.568229 [ NCBI ]
CGAP (NCI)Hs.568229
Gene ExpressionUQCRHL [ NCBI-GEO ]   UQCRHL [ EBI - ARRAY_EXPRESS ]   UQCRHL [ SEEK ]   UQCRHL [ MEM ]
Gene Expression Viewer (FireBrowse)UQCRHL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)440567
GTEX Portal (Tissue expression)UQCRHL
Protein : pattern, domain, 3D structure
UniProt/SwissProtA0A096LP55   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA0A096LP55  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA0A096LP55
Splice isoforms : SwissVarA0A096LP55
PhosPhoSitePlusA0A096LP55
Domains : Interpro (EBI)Cyt_b-c1_6    Ubol_cytC_Rdtase_hinge_dom   
Domain families : Pfam (Sanger)UCR_hinge (PF02320)   
Domain families : Pfam (NCBI)pfam02320   
Conserved Domain (NCBI)UQCRHL
DMDM Disease mutations440567
Blocks (Seattle)UQCRHL
SuperfamilyA0A096LP55
Peptide AtlasA0A096LP55
IPIIPI00455418   
Protein Interaction databases
DIP (DOE-UCLA)A0A096LP55
IntAct (EBI)A0A096LP55
BioGRIDUQCRHL
STRING (EMBL)UQCRHL
ZODIACUQCRHL
Ontologies - Pathways
QuickGOA0A096LP55
Ontology : AmiGOmitochondrial respiratory chain complex III  mitochondrial electron transport, ubiquinol to cytochrome c  ubiquinol-cytochrome-c reductase activity  aerobic respiration  hydrogen ion transmembrane transport  
Ontology : EGO-EBImitochondrial respiratory chain complex III  mitochondrial electron transport, ubiquinol to cytochrome c  ubiquinol-cytochrome-c reductase activity  aerobic respiration  hydrogen ion transmembrane transport  
Pathways : KEGGOxidative phosphorylation    Cardiac muscle contraction    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkUQCRHL
Atlas of Cancer Signalling NetworkUQCRHL
Wikipedia pathwaysUQCRHL
Orthology - Evolution
OrthoDB440567
Phylogenetic Trees/Animal Genes : TreeFamUQCRHL
HOVERGENA0A096LP55
HOGENOMA0A096LP55
Homologs : HomoloGeneUQCRHL
Homology/Alignments : Family Browser (UCSC)UQCRHL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUQCRHL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UQCRHL
dbVarUQCRHL
ClinVarUQCRHL
1000_GenomesUQCRHL 
Exome Variant ServerUQCRHL
ExAC (Exome Aggregation Consortium)UQCRHL (select the gene name)
Genetic variants : HAPMAP440567
Genomic Variants (DGV)UQCRHL [DGVbeta]
DECIPHERUQCRHL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUQCRHL 
Mutations
ICGC Data PortalUQCRHL 
TCGA Data PortalUQCRHL 
Broad Tumor PortalUQCRHL
OASIS PortalUQCRHL [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDUQCRHL
BioMutasearch UQCRHL
DgiDB (Drug Gene Interaction Database)UQCRHL
DoCM (Curated mutations)UQCRHL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UQCRHL (select a term)
intoGenUQCRHL
Cancer3DUQCRHL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenUQCRHL
Genetic Testing Registry UQCRHL
NextProtA0A096LP55 [Medical]
TSGene440567
GENETestsUQCRHL
Huge Navigator UQCRHL [HugePedia]
snp3D : Map Gene to Disease440567
BioCentury BCIQUQCRHL
ClinGenUQCRHL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440567
Clinical trialUQCRHL
Miscellaneous
canSAR (ICR)UQCRHL (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUQCRHL
EVEXUQCRHL
GoPubMedUQCRHL
iHOPUQCRHL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:00:49 CEST 2017

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