Atlas of Genetics and Cytogenetics in Oncology and Haematology


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UQCRQ (ubiquinol-cytochrome c reductase complex III subunit VII)

Identity

Alias_namesubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa
Alias_symbol (synonym)QP-C
QCR8
UQCR7
Other aliasMC3DN4
QPC
HGNC (Hugo) UQCRQ
LocusID (NCBI) 27089
Atlas_Id 75508
Location 5q31.1  [Link to chromosome band 5q31]
Location_base_pair Starts at 132866627 and ends at 132868844 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CPD (17q11.2) / UQCRQ (5q31.1)CSAD (12q13.13) / UQCRQ (5q31.1)UQCRQ (5q31.1) / FGF14 (13q33.1)
UQCRQ (5q31.1) / LEAP2 (5q31.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UQCRQ   29594
Cards
Entrez_Gene (NCBI)UQCRQ  27089  ubiquinol-cytochrome c reductase complex III subunit VII
AliasesMC3DN4; QCR8; QP-C; QPC; 
UQCR7
GeneCards (Weizmann)UQCRQ
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:132866627-132868844 [Contig_View]  UQCRQ [Vega]
TCGA cBioPortalUQCRQ
AceView (NCBI)UQCRQ
Genatlas (Paris)UQCRQ
WikiGenes27089
SOURCE (Princeton)UQCRQ
Genetics Home Reference (NIH)UQCRQ
Genomic and cartography
GoldenPath hg38 (UCSC)UQCRQ  -     chr5:132866627-132868844 +  5q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UQCRQ  -     5q31.1   [Description]    (hg19-Feb_2009)
EnsemblUQCRQ - 5q31.1 [CytoView hg19]  UQCRQ - 5q31.1 [CytoView hg38]
Mapping of homologs : NCBIUQCRQ [Mapview hg19]  UQCRQ [Mapview hg38]
OMIM612080   615159   
Gene and transcription
Genbank (Entrez)AK297061 AK312148 AW327741 BC001390 BC064949
RefSeq transcript (Entrez)NM_014402
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UQCRQ
Cluster EST : UnigeneHs.146602 [ NCBI ]
CGAP (NCI)Hs.146602
Gene ExpressionUQCRQ [ NCBI-GEO ]   UQCRQ [ EBI - ARRAY_EXPRESS ]   UQCRQ [ SEEK ]   UQCRQ [ MEM ]
Gene Expression Viewer (FireBrowse)UQCRQ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27089
GTEX Portal (Tissue expression)UQCRQ
Protein : pattern, domain, 3D structure
UniProt/SwissProtO14949   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO14949  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO14949
Splice isoforms : SwissVarO14949
PhosPhoSitePlusO14949
Domains : Interpro (EBI)Cyt_bc1_su8   
Domain families : Pfam (Sanger)UcrQ (PF02939)   
Domain families : Pfam (NCBI)pfam02939   
Domain structure : Prodom (Prabi Lyon)UcrQ (PD331499)   
Conserved Domain (NCBI)UQCRQ
DMDM Disease mutations27089
Blocks (Seattle)UQCRQ
SuperfamilyO14949
Peptide AtlasO14949
HPRD17941
IPIIPI00024742   
Protein Interaction databases
DIP (DOE-UCLA)O14949
IntAct (EBI)O14949
BioGRIDUQCRQ
STRING (EMBL)UQCRQ
ZODIACUQCRQ
Ontologies - Pathways
QuickGOO14949
Ontology : AmiGOmitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex III  mitochondrial electron transport, ubiquinol to cytochrome c  mitochondrial electron transport, ubiquinol to cytochrome c  ubiquinol-cytochrome-c reductase activity  subthalamus development  pons development  cerebellar Purkinje cell layer development  hippocampus development  thalamus development  hypothalamus development  pyramidal neuron development  midbrain development  hydrogen ion transmembrane transport  
Ontology : EGO-EBImitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex III  mitochondrial electron transport, ubiquinol to cytochrome c  mitochondrial electron transport, ubiquinol to cytochrome c  ubiquinol-cytochrome-c reductase activity  subthalamus development  pons development  cerebellar Purkinje cell layer development  hippocampus development  thalamus development  hypothalamus development  pyramidal neuron development  midbrain development  hydrogen ion transmembrane transport  
Pathways : KEGGOxidative phosphorylation    Cardiac muscle contraction    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkUQCRQ
Atlas of Cancer Signalling NetworkUQCRQ
Wikipedia pathwaysUQCRQ
Orthology - Evolution
OrthoDB27089
Phylogenetic Trees/Animal Genes : TreeFamUQCRQ
HOVERGENO14949
HOGENOMO14949
Homologs : HomoloGeneUQCRQ
Homology/Alignments : Family Browser (UCSC)UQCRQ
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUQCRQ [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UQCRQ
dbVarUQCRQ
ClinVarUQCRQ
1000_GenomesUQCRQ 
Exome Variant ServerUQCRQ
ExAC (Exome Aggregation Consortium)UQCRQ (select the gene name)
Genetic variants : HAPMAP27089
Genomic Variants (DGV)UQCRQ [DGVbeta]
DECIPHERUQCRQ [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUQCRQ 
Mutations
ICGC Data PortalUQCRQ 
TCGA Data PortalUQCRQ 
Broad Tumor PortalUQCRQ
OASIS PortalUQCRQ [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUQCRQ  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUQCRQ
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch UQCRQ
DgiDB (Drug Gene Interaction Database)UQCRQ
DoCM (Curated mutations)UQCRQ (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UQCRQ (select a term)
intoGenUQCRQ
Cancer3DUQCRQ(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612080    615159   
Orphanet3378   
MedgenUQCRQ
Genetic Testing Registry UQCRQ
NextProtO14949 [Medical]
TSGene27089
GENETestsUQCRQ
Target ValidationUQCRQ
Huge Navigator UQCRQ [HugePedia]
snp3D : Map Gene to Disease27089
BioCentury BCIQUQCRQ
ClinGenUQCRQ
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD27089
Chemical/Pharm GKB GenePA142670637
Clinical trialUQCRQ
Miscellaneous
canSAR (ICR)UQCRQ (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUQCRQ
EVEXUQCRQ
GoPubMedUQCRQ
iHOPUQCRQ
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:48:16 CEST 2017

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