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URB1-AS1 (URB1 antisense RNA 1 (head to head))

Identity

Alias_namesC21orf119
chromosome 21 open reading frame 119
Alias_symbol (synonym)PRED84
MGC14136
Other alias
HGNC (Hugo) URB1-AS1
LocusID (NCBI) 84996
Atlas_Id 78187
Location 21q22.11  [Link to chromosome band 21q22]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)URB1-AS1   23128
Cards
Entrez_Gene (NCBI)URB1-AS1  84996  URB1 antisense RNA 1 (head to head)
AliasesC21orf119; PRED84
GeneCards (Weizmann)URB1-AS1
Ensembl hg19 (Hinxton)ENSG00000256073 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000256073 [Gene_View]  - [Contig_View]  URB1-AS1 [Vega]
ICGC DataPortalENSG00000256073
TCGA cBioPortalURB1-AS1
AceView (NCBI)URB1-AS1
Genatlas (Paris)URB1-AS1
WikiGenes84996
SOURCE (Princeton)URB1-AS1
Genetics Home Reference (NIH)URB1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)URB1-AS1  -  
GoldenPath hg19 (UCSC)URB1-AS1  -  
EnsemblURB1-AS1 - [CytoView hg19]  URB1-AS1 - [CytoView hg38]
Mapping of homologs : NCBIURB1-AS1 [Mapview hg19]  URB1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI369236 AK026376 BC007928
RefSeq transcript (Entrez)NM_032910
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)URB1-AS1
Cluster EST : UnigeneHs.58149 [ NCBI ]
CGAP (NCI)Hs.58149
Alternative Splicing GalleryENSG00000256073
Gene ExpressionURB1-AS1 [ NCBI-GEO ]   URB1-AS1 [ EBI - ARRAY_EXPRESS ]   URB1-AS1 [ SEEK ]   URB1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)URB1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84996
GTEX Portal (Tissue expression)URB1-AS1
Human Protein AtlasENSG00000256073-URB1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96HZ7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96HZ7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96HZ7
Splice isoforms : SwissVarQ96HZ7
PhosPhoSitePlusQ96HZ7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)URB1-AS1
DMDM Disease mutations84996
Blocks (Seattle)URB1-AS1
SuperfamilyQ96HZ7
Human Protein Atlas [tissue]ENSG00000256073-URB1-AS1 [tissue]
Peptide AtlasQ96HZ7
HPRD12792
IPIIPI00063421   
Protein Interaction databases
DIP (DOE-UCLA)Q96HZ7
IntAct (EBI)Q96HZ7
FunCoupENSG00000256073
BioGRIDURB1-AS1
STRING (EMBL)URB1-AS1
ZODIACURB1-AS1
Ontologies - Pathways
QuickGOQ96HZ7
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkURB1-AS1
Atlas of Cancer Signalling NetworkURB1-AS1
Wikipedia pathwaysURB1-AS1
Orthology - Evolution
OrthoDB84996
GeneTree (enSembl)ENSG00000256073
Phylogenetic Trees/Animal Genes : TreeFamURB1-AS1
HOVERGENQ96HZ7
HOGENOMQ96HZ7
Homologs : HomoloGeneURB1-AS1
Homology/Alignments : Family Browser (UCSC)URB1-AS1
Gene fusions - Rearrangements
Tumor Fusion PortalURB1-AS1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerURB1-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)URB1-AS1
dbVarURB1-AS1
ClinVarURB1-AS1
1000_GenomesURB1-AS1 
Exome Variant ServerURB1-AS1
ExAC (Exome Aggregation Consortium)ENSG00000256073
GNOMAD BrowserENSG00000256073
Genetic variants : HAPMAP84996
Genomic Variants (DGV)URB1-AS1 [DGVbeta]
DECIPHERURB1-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisURB1-AS1 
Mutations
ICGC Data PortalURB1-AS1 
TCGA Data PortalURB1-AS1 
Broad Tumor PortalURB1-AS1
OASIS PortalURB1-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDURB1-AS1
BioMutasearch URB1-AS1
DgiDB (Drug Gene Interaction Database)URB1-AS1
DoCM (Curated mutations)URB1-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)URB1-AS1 (select a term)
intoGenURB1-AS1
Cancer3DURB1-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETURB1-AS1
MedgenURB1-AS1
Genetic Testing Registry URB1-AS1
NextProtQ96HZ7 [Medical]
TSGene84996
GENETestsURB1-AS1
Target ValidationURB1-AS1
Huge Navigator URB1-AS1 [HugePedia]
snp3D : Map Gene to Disease84996
BioCentury BCIQURB1-AS1
ClinGenURB1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84996
Chemical/Pharm GKB GenePA134883249
Clinical trialURB1-AS1
Miscellaneous
canSAR (ICR)URB1-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineURB1-AS1
EVEXURB1-AS1
GoPubMedURB1-AS1
iHOPURB1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:43:22 CET 2017

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