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USF3 (upstream transcription factor family member 3)

Identity

Alias_namesKIAA2018
KIAA2018
Other alias
HGNC (Hugo) USF3
LocusID (NCBI) 205717
Atlas_Id 78029
Location 3q13.2  [Link to chromosome band 3q13]
Location_base_pair Starts at 113367233 and ends at 113415493 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MAN1A2 (1p12) / USF3 (3q13.2)USF3 (3q13.2) / RPL35A (3q29)USF3 (3q13.2) / TAX1BP3 (17p13.2)
USF3 (3q13.2) / USF3 (3q13.2)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)USF3   30494
Cards
Entrez_Gene (NCBI)USF3  205717  upstream transcription factor family member 3
AliasesKIAA2018
GeneCards (Weizmann)USF3
Ensembl hg19 (Hinxton)ENSG00000176542 [Gene_View]  chr3:113367233-113415493 [Contig_View]  USF3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000176542 [Gene_View]  chr3:113367233-113415493 [Contig_View]  USF3 [Vega]
ICGC DataPortalENSG00000176542
TCGA cBioPortalUSF3
AceView (NCBI)USF3
Genatlas (Paris)USF3
WikiGenes205717
SOURCE (Princeton)USF3
Genetics Home Reference (NIH)USF3
Genomic and cartography
GoldenPath hg19 (UCSC)USF3  -     chr3:113367233-113415493 -  3q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)USF3  -     3q13.2   [Description]    (hg38-Dec_2013)
EnsemblUSF3 - 3q13.2 [CytoView hg19]  USF3 - 3q13.2 [CytoView hg38]
Mapping of homologs : NCBIUSF3 [Mapview hg19]  USF3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001009899
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)USF3
Cluster EST : UnigeneHs.632570 [ NCBI ]
CGAP (NCI)Hs.632570
Alternative Splicing GalleryENSG00000176542
Gene ExpressionUSF3 [ NCBI-GEO ]   USF3 [ EBI - ARRAY_EXPRESS ]   USF3 [ SEEK ]   USF3 [ MEM ]
Gene Expression Viewer (FireBrowse)USF3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)205717
GTEX Portal (Tissue expression)USF3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)USF3
DMDM Disease mutations205717
Blocks (Seattle)USF3
Human Protein AtlasENSG00000176542
HPRD13912
IPIIPI00217002   IPI00829891   
Protein Interaction databases
FunCoupENSG00000176542
BioGRIDUSF3
STRING (EMBL)USF3
ZODIACUSF3
Ontologies - Pathways
Huge Navigator USF3 [HugePedia]
snp3D : Map Gene to Disease205717
BioCentury BCIQUSF3
ClinGenUSF3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD205717
Chemical/Pharm GKB GenePA142671594
Clinical trialUSF3
Miscellaneous
canSAR (ICR)USF3 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUSF3
EVEXUSF3
GoPubMedUSF3
iHOPUSF3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:50:56 CET 2017

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