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USP17L26 (ubiquitin specific peptidase 17-like family member 26)

Identity

Other alias-
HGNC (Hugo) USP17L26
LocusID (NCBI) 728379
Atlas_Id 75537
Location 4p16.1  [Link to chromosome band 4p16]
Location_base_pair Starts at 9325165 and ends at 9326757 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)USP17L26   44454
Cards
Entrez_Gene (NCBI)USP17L26  728379  ubiquitin specific peptidase 17-like family member 26
Aliases
GeneCards (Weizmann)USP17L26
Ensembl hg19 (Hinxton)ENSG00000229579 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229579 [Gene_View]  chr4:9325165-9326757 [Contig_View]  USP17L26 [Vega]
ICGC DataPortalENSG00000229579
TCGA cBioPortalUSP17L26
AceView (NCBI)USP17L26
Genatlas (Paris)USP17L26
WikiGenes728379
SOURCE (Princeton)USP17L26
Genetics Home Reference (NIH)USP17L26
Genomic and cartography
GoldenPath hg38 (UCSC)USP17L26  -     chr4:9325165-9326757 +  4p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)USP17L26  -     4p16.1   [Description]    (hg19-Feb_2009)
EnsemblUSP17L26 - 4p16.1 [CytoView hg19]  USP17L26 - 4p16.1 [CytoView hg38]
Mapping of homologs : NCBIUSP17L26 [Mapview hg19]  USP17L26 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001242328
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)USP17L26
Cluster EST : UnigeneHs.553810 [ NCBI ]
CGAP (NCI)Hs.553810
Alternative Splicing GalleryENSG00000229579
Gene ExpressionUSP17L26 [ NCBI-GEO ]   USP17L26 [ EBI - ARRAY_EXPRESS ]   USP17L26 [ SEEK ]   USP17L26 [ MEM ]
Gene Expression Viewer (FireBrowse)USP17L26 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728379
GTEX Portal (Tissue expression)USP17L26
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0WX57   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ0WX57  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ0WX57
Splice isoforms : SwissVarQ0WX57
Catalytic activity : Enzyme3.4.19.12 [ Enzyme-Expasy ]   3.4.19.123.4.19.12 [ IntEnz-EBI ]   3.4.19.12 [ BRENDA ]   3.4.19.12 [ KEGG ]   
PhosPhoSitePlusQ0WX57
Domaine pattern : Prosite (Expaxy)USP_1 (PS00972)    USP_2 (PS00973)    USP_3 (PS50235)   
Domains : Interpro (EBI)HABP4_PAIRBP1-bd    Peptidase_C19_UCH    USP_CS    USP_dom   
Domain families : Pfam (Sanger)HABP4_PAI-RBP1 (PF04774)    UCH (PF00443)   
Domain families : Pfam (NCBI)pfam04774    pfam00443   
Conserved Domain (NCBI)USP17L26
DMDM Disease mutations728379
Blocks (Seattle)USP17L26
SuperfamilyQ0WX57
Human Protein AtlasENSG00000229579
Peptide AtlasQ0WX57
Protein Interaction databases
DIP (DOE-UCLA)Q0WX57
IntAct (EBI)Q0WX57
FunCoupENSG00000229579
BioGRIDUSP17L26
STRING (EMBL)USP17L26
ZODIACUSP17L26
Ontologies - Pathways
QuickGOQ0WX57
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkUSP17L26
Atlas of Cancer Signalling NetworkUSP17L26
Wikipedia pathwaysUSP17L26
Orthology - Evolution
OrthoDB728379
GeneTree (enSembl)ENSG00000229579
Phylogenetic Trees/Animal Genes : TreeFamUSP17L26
HOVERGENQ0WX57
HOGENOMQ0WX57
Homologs : HomoloGeneUSP17L26
Homology/Alignments : Family Browser (UCSC)USP17L26
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUSP17L26 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)USP17L26
dbVarUSP17L26
ClinVarUSP17L26
1000_GenomesUSP17L26 
Exome Variant ServerUSP17L26
ExAC (Exome Aggregation Consortium)USP17L26 (select the gene name)
Genetic variants : HAPMAP728379
Genomic Variants (DGV)USP17L26 [DGVbeta]
DECIPHERUSP17L26 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUSP17L26 
Mutations
ICGC Data PortalUSP17L26 
TCGA Data PortalUSP17L26 
Broad Tumor PortalUSP17L26
OASIS PortalUSP17L26 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUSP17L26  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUSP17L26
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch USP17L26
DgiDB (Drug Gene Interaction Database)USP17L26
DoCM (Curated mutations)USP17L26 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)USP17L26 (select a term)
intoGenUSP17L26
Cancer3DUSP17L26(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenUSP17L26
Genetic Testing Registry USP17L26
NextProtQ0WX57 [Medical]
TSGene728379
GENETestsUSP17L26
Target ValidationUSP17L26
Huge Navigator USP17L26 [HugePedia]
snp3D : Map Gene to Disease728379
BioCentury BCIQUSP17L26
ClinGenUSP17L26
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728379
Chemical/Pharm GKB GenePA166049142
Clinical trialUSP17L26
Miscellaneous
canSAR (ICR)USP17L26 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUSP17L26
EVEXUSP17L26
GoPubMedUSP17L26
iHOPUSP17L26
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:48:22 CEST 2017

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