USP25 (ubiquitin specific peptidase 25)

Identity

Other names	USP21
HGNC	USP25
Location	21q11.2
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	USP25   12624
Entrez_Gene	USP25  29761  ubiquitin specific peptidase 25
	Cards
GeneCards	USP25
Ensembl	USP25 [Search_View]   ENSG00000155313 [Gene_View]
Genatlas	USP25
GeneLynx	USP25
eGenome	USP25
euGene	29761
	Genomic and cartography
GoldenPath	USP25  -  21q11.2   chr21:16024367-16174248 +  21q21.1   [Description]    (hg18-March_2006)
Ensembl	USP25 - 21q21.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	USP25
	Gene and transcription
Genbank	AF134213 [ ENTREZ ]
Genbank	AF170562 [ ENTREZ ]
Genbank	AK022447 [ ENTREZ ]
Genbank	AK022574 [ ENTREZ ]
Genbank	BC015930 [ ENTREZ ]
RefSeq	NM_013396 [ SRS ]    NM_013396 [ ENTREZ ]
RefSeq	AC_000064 [ SRS ]    AC_000064 [ ENTREZ ]
RefSeq	AC_000153 [ SRS ]    AC_000153 [ ENTREZ ]
RefSeq	NC_000021 [ SRS ]    NC_000021 [ ENTREZ ]
RefSeq	NT_011512 [ SRS ]    NT_011512 [ ENTREZ ]
RefSeq	NW_001838706 [ SRS ]    NW_001838706 [ ENTREZ ]
RefSeq	NW_927384 [ SRS ]    NW_927384 [ ENTREZ ]
AceView	USP25 AceView - NCBI
Unigene	Hs.473370 [ SRS ]    Hs.473370 [ NCBI ]     HS473370 [ spliceNest ]
Fast-db	928 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q6DHZ9 [ SRS]    Q6DHZ9 [ EXPASY ]     Q6DHZ9 [ INTERPRO ]     Q6DHZ9 [ UNIPROT ]
Prosite	PS00972 UCH_2_1 [ SRS ]    PS00972 UCH_2_1 [ Expasy ]
Prosite	PS00973 UCH_2_2 [ SRS ]    PS00973 UCH_2_2 [ Expasy ]
Prosite	PS50235 UCH_2_3 [ SRS ]    PS50235 UCH_2_3 [ Expasy ]
Prosite	PS50330 UIM [ SRS ]    PS50330 UIM [ Expasy ]
Interpro	IPR001394 Peptidase_C19 [ SRS ]    IPR001394 Peptidase_C19 [ EBI ]
Interpro	IPR000449 UBA/transl_elong_EF1B_N [ SRS ]    IPR000449 UBA/transl_elong_EF1B_N [ EBI ]
Interpro	IPR003903 UIM [ SRS ]    IPR003903 UIM [ EBI ]
CluSTr	Q6DHZ9
Pfam	PF00627 UBA [ SRS ]    PF00627 UBA [ Sanger ]    pfam00627 [ NCBI-CDD ]
Pfam	PF00443 UCH [ SRS ]    PF00443 UCH [ Sanger ]    pfam00443 [ NCBI-CDD ]
Pfam	PF02809 UIM [ SRS ]    PF02809 UIM [ Sanger ]    pfam02809 [ NCBI-CDD ]
Smart	SM00726 UIM [EMBL]
Blocks	Q6DHZ9
HPRD	05296
	Protein Interaction databases
DIP	Q6DHZ9
IntAct	Q6DHZ9
	Polymorphism : SNP, mutations, diseases
OMIM	604736    [ map ]
GENECLINICS	604736
SNP	USP25 [dbSNP-NCBI]
SNP	NM_013396 [SNP-NCI]
SNP	USP25 [GeneSNPs - Utah]  USP25] [HGBASE - SRS]
HAPMAP	USP25 [HAPMAP]
COSMIC	USP25 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	USP25
	General knowledge
Family Browser	USP25 [UCSC Family Browser]
SOURCE	NM_013396
SMD	Hs.473370
SAGE	Hs.473370
GO	ubiquitin thiolesterase activity [Amigo]  ubiquitin thiolesterase activity
GO	protein modification process [Amigo]  protein modification process
GO	proteolysis [Amigo]  proteolysis
GO	ubiquitin-dependent protein catabolic process [Amigo]  ubiquitin-dependent protein catabolic process
GO	cysteine-type peptidase activity [Amigo]  cysteine-type peptidase activity
PubGene	USP25
TreeFam	USP25
CTD	29761 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	USP25 Related clones (RZPD - Berlin)
	PubMed
PubMed	8 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:37:42 2008