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USP51 (ubiquitin specific peptidase 51)

Identity

Alias_namesubiquitin specific protease 51
Other alias-
HGNC (Hugo) USP51
LocusID (NCBI) 158880
Atlas_Id 75568
Location Xp11.21  [Link to chromosome band Xp11]
Location_base_pair Starts at 55484616 and ends at 55489198 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)USP51   23086
Cards
Entrez_Gene (NCBI)USP51  158880  ubiquitin specific peptidase 51
Aliases
GeneCards (Weizmann)USP51
Ensembl hg19 (Hinxton)ENSG00000247746 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000247746 [Gene_View]  chrX:55484616-55489198 [Contig_View]  USP51 [Vega]
ICGC DataPortalENSG00000247746
TCGA cBioPortalUSP51
AceView (NCBI)USP51
Genatlas (Paris)USP51
WikiGenes158880
SOURCE (Princeton)USP51
Genetics Home Reference (NIH)USP51
Genomic and cartography
GoldenPath hg38 (UCSC)USP51  -     chrX:55484616-55489198 -  Xp11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)USP51  -     Xp11.21   [Description]    (hg19-Feb_2009)
EnsemblUSP51 - Xp11.21 [CytoView hg19]  USP51 - Xp11.21 [CytoView hg38]
Mapping of homologs : NCBIUSP51 [Mapview hg19]  USP51 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI934832 AJ583823 BC035907 BC131541 BC172281
RefSeq transcript (Entrez)NM_201286
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)USP51
Cluster EST : UnigeneHs.607524 [ NCBI ]
CGAP (NCI)Hs.607524
Alternative Splicing GalleryENSG00000247746
Gene ExpressionUSP51 [ NCBI-GEO ]   USP51 [ EBI - ARRAY_EXPRESS ]   USP51 [ SEEK ]   USP51 [ MEM ]
Gene Expression Viewer (FireBrowse)USP51 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)158880
GTEX Portal (Tissue expression)USP51
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ70EK9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ70EK9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ70EK9
Splice isoforms : SwissVarQ70EK9
Catalytic activity : Enzyme3.4.19.12 [ Enzyme-Expasy ]   3.4.19.123.4.19.12 [ IntEnz-EBI ]   3.4.19.12 [ BRENDA ]   3.4.19.12 [ KEGG ]   
PhosPhoSitePlusQ70EK9
Domaine pattern : Prosite (Expaxy)USP_1 (PS00972)    USP_2 (PS00973)    USP_3 (PS50235)    ZF_UBP (PS50271)   
Domains : Interpro (EBI)Peptidase_C19_UCH    USP51    USP_CS    USP_dom    Znf_RING/FYVE/PHD    Znf_UBP   
Domain families : Pfam (Sanger)UCH (PF00443)    zf-UBP (PF02148)   
Domain families : Pfam (NCBI)pfam00443    pfam02148   
Conserved Domain (NCBI)USP51
DMDM Disease mutations158880
Blocks (Seattle)USP51
SuperfamilyQ70EK9
Human Protein AtlasENSG00000247746
Peptide AtlasQ70EK9
HPRD07167
IPIIPI00398738   
Protein Interaction databases
DIP (DOE-UCLA)Q70EK9
IntAct (EBI)Q70EK9
FunCoupENSG00000247746
BioGRIDUSP51
STRING (EMBL)USP51
ZODIACUSP51
Ontologies - Pathways
QuickGOQ70EK9
Ontology : AmiGOchromatin binding  thiol-dependent ubiquitin-specific protease activity  ubiquitin-dependent protein catabolic process  zinc ion binding  histone deubiquitination  protein deubiquitination  histone binding  regulation of response to DNA damage stimulus  
Ontology : EGO-EBIchromatin binding  thiol-dependent ubiquitin-specific protease activity  ubiquitin-dependent protein catabolic process  zinc ion binding  histone deubiquitination  protein deubiquitination  histone binding  regulation of response to DNA damage stimulus  
NDEx NetworkUSP51
Atlas of Cancer Signalling NetworkUSP51
Wikipedia pathwaysUSP51
Orthology - Evolution
OrthoDB158880
GeneTree (enSembl)ENSG00000247746
Phylogenetic Trees/Animal Genes : TreeFamUSP51
HOVERGENQ70EK9
HOGENOMQ70EK9
Homologs : HomoloGeneUSP51
Homology/Alignments : Family Browser (UCSC)USP51
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUSP51 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)USP51
dbVarUSP51
ClinVarUSP51
1000_GenomesUSP51 
Exome Variant ServerUSP51
ExAC (Exome Aggregation Consortium)USP51 (select the gene name)
Genetic variants : HAPMAP158880
Genomic Variants (DGV)USP51 [DGVbeta]
DECIPHERUSP51 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUSP51 
Mutations
ICGC Data PortalUSP51 
TCGA Data PortalUSP51 
Broad Tumor PortalUSP51
OASIS PortalUSP51 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUSP51  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUSP51
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch USP51
DgiDB (Drug Gene Interaction Database)USP51
DoCM (Curated mutations)USP51 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)USP51 (select a term)
intoGenUSP51
Cancer3DUSP51(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenUSP51
Genetic Testing Registry USP51
NextProtQ70EK9 [Medical]
TSGene158880
GENETestsUSP51
Target ValidationUSP51
Huge Navigator USP51 [HugePedia]
snp3D : Map Gene to Disease158880
BioCentury BCIQUSP51
ClinGenUSP51
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD158880
Chemical/Pharm GKB GenePA134888611
Clinical trialUSP51
Miscellaneous
canSAR (ICR)USP51 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUSP51
EVEXUSP51
GoPubMedUSP51
iHOPUSP51
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:43:27 CEST 2017

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