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UTP14C (UTP14, small subunit processome component homolog C (S. cerevisiae))

Identity

Alias_namesKIAA0266
KIAA0266
UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
Alias_symbol (synonym)2700066J21Rik
Other aliasUTP14B
HGNC (Hugo) UTP14C
LocusID (NCBI) 9724
Atlas_Id 52769
Location 13q14.3  [Link to chromosome band 13q14]
Location_base_pair Starts at 52024691 and ends at 52033600 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UTP14C   20321
Cards
Entrez_Gene (NCBI)UTP14C  9724  UTP14, small subunit processome component homolog C (S. cerevisiae)
Aliases2700066J21Rik; KIAA0266; UTP14B
GeneCards (Weizmann)UTP14C
Ensembl hg19 (Hinxton)ENSG00000253797 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253797 [Gene_View]  chr13:52024691-52033600 [Contig_View]  UTP14C [Vega]
ICGC DataPortalENSG00000253797
TCGA cBioPortalUTP14C
AceView (NCBI)UTP14C
Genatlas (Paris)UTP14C
WikiGenes9724
SOURCE (Princeton)UTP14C
Genetics Home Reference (NIH)UTP14C
Genomic and cartography
GoldenPath hg38 (UCSC)UTP14C  -     chr13:52024691-52033600 +  13q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UTP14C  -     13q14.3   [Description]    (hg19-Feb_2009)
EnsemblUTP14C - 13q14.3 [CytoView hg19]  UTP14C - 13q14.3 [CytoView hg38]
Mapping of homologs : NCBIUTP14C [Mapview hg19]  UTP14C [Mapview hg38]
OMIM608969   
Gene and transcription
Genbank (Entrez)AI076921 BC089407 BC122536 D87455 EU831772
RefSeq transcript (Entrez)NM_021645
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UTP14C
Cluster EST : UnigeneHs.512963 [ NCBI ]
CGAP (NCI)Hs.512963
Alternative Splicing GalleryENSG00000253797
Gene ExpressionUTP14C [ NCBI-GEO ]   UTP14C [ EBI - ARRAY_EXPRESS ]   UTP14C [ SEEK ]   UTP14C [ MEM ]
Gene Expression Viewer (FireBrowse)UTP14C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9724
GTEX Portal (Tissue expression)UTP14C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TAP6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5TAP6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5TAP6
Splice isoforms : SwissVarQ5TAP6
PhosPhoSitePlusQ5TAP6
Domains : Interpro (EBI)SSU_processome_Utp14   
Domain families : Pfam (Sanger)Utp14 (PF04615)   
Domain families : Pfam (NCBI)pfam04615   
Conserved Domain (NCBI)UTP14C
DMDM Disease mutations9724
Blocks (Seattle)UTP14C
SuperfamilyQ5TAP6
Human Protein AtlasENSG00000253797
Peptide AtlasQ5TAP6
HPRD12346
IPIIPI00550793   
Protein Interaction databases
DIP (DOE-UCLA)Q5TAP6
IntAct (EBI)Q5TAP6
FunCoupENSG00000253797
BioGRIDUTP14C
STRING (EMBL)UTP14C
ZODIACUTP14C
Ontologies - Pathways
QuickGOQ5TAP6
Ontology : AmiGOprotein binding  nucleolus  nucleolus  cytosol  multicellular organism development  spermatogenesis  cell differentiation  maturation of SSU-rRNA  small-subunit processome  meiotic cell cycle  
Ontology : EGO-EBIprotein binding  nucleolus  nucleolus  cytosol  multicellular organism development  spermatogenesis  cell differentiation  maturation of SSU-rRNA  small-subunit processome  meiotic cell cycle  
Pathways : KEGGRibosome biogenesis in eukaryotes   
NDEx NetworkUTP14C
Atlas of Cancer Signalling NetworkUTP14C
Wikipedia pathwaysUTP14C
Orthology - Evolution
OrthoDB9724
GeneTree (enSembl)ENSG00000253797
Phylogenetic Trees/Animal Genes : TreeFamUTP14C
HOVERGENQ5TAP6
HOGENOMQ5TAP6
Homologs : HomoloGeneUTP14C
Homology/Alignments : Family Browser (UCSC)UTP14C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUTP14C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UTP14C
dbVarUTP14C
ClinVarUTP14C
1000_GenomesUTP14C 
Exome Variant ServerUTP14C
ExAC (Exome Aggregation Consortium)UTP14C (select the gene name)
Genetic variants : HAPMAP9724
Genomic Variants (DGV)UTP14C [DGVbeta]
DECIPHERUTP14C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUTP14C 
Mutations
ICGC Data PortalUTP14C 
TCGA Data PortalUTP14C 
Broad Tumor PortalUTP14C
OASIS PortalUTP14C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUTP14C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUTP14C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UTP14C
DgiDB (Drug Gene Interaction Database)UTP14C
DoCM (Curated mutations)UTP14C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UTP14C (select a term)
intoGenUTP14C
Cancer3DUTP14C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608969   
Orphanet
MedgenUTP14C
Genetic Testing Registry UTP14C
NextProtQ5TAP6 [Medical]
TSGene9724
GENETestsUTP14C
Target ValidationUTP14C
Huge Navigator UTP14C [HugePedia]
snp3D : Map Gene to Disease9724
BioCentury BCIQUTP14C
ClinGenUTP14C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9724
Chemical/Pharm GKB GenePA134944828
Clinical trialUTP14C
Miscellaneous
canSAR (ICR)UTP14C (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUTP14C
EVEXUTP14C
GoPubMedUTP14C
iHOPUTP14C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:37:45 CEST 2017

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