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UTP4 (UTP4 small subunit processome component)

Identity

Alias_namesCIRH1A
cirrhosis, autosomal recessive 1A (cirhin)
Alias_symbol (synonym)NAIC
FLJ14728
KIAA1988
TEX292
CIRHIN
Other alias
HGNC (Hugo) UTP4
LocusID (NCBI) 84916
Atlas_Id 78031
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 69166499 and ends at 69202937 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ACE2 (Xp22.2) / UTP4 (16q22.1)CYB5B (16q22.1) / UTP4 (16q22.1)DDX19A (16q22.1) / UTP4 (16q22.1)
MYO19 (17q12) / UTP4 (16q22.1)SNTB2 (16q22.1) / UTP4 (16q22.1)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)UTP4   1983
Cards
Entrez_Gene (NCBI)UTP4  84916  UTP4 small subunit processome component
AliasesCIRH1A; CIRHIN; NAIC; TEX292
GeneCards (Weizmann)UTP4
Ensembl hg19 (Hinxton)ENSG00000141076 [Gene_View]  chr16:69166499-69202937 [Contig_View]  UTP4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000141076 [Gene_View]  chr16:69166499-69202937 [Contig_View]  UTP4 [Vega]
ICGC DataPortalENSG00000141076
TCGA cBioPortalUTP4
AceView (NCBI)UTP4
Genatlas (Paris)UTP4
WikiGenes84916
SOURCE (Princeton)UTP4
Genetics Home Reference (NIH)UTP4
Genomic and cartography
GoldenPath hg19 (UCSC)UTP4  -     chr16:69166499-69202937 +  16q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)UTP4  -     16q22.1   [Description]    (hg38-Dec_2013)
EnsemblUTP4 - 16q22.1 [CytoView hg19]  UTP4 - 16q22.1 [CytoView hg38]
Mapping of homologs : NCBIUTP4 [Mapview hg19]  UTP4 [Mapview hg38]
OMIM604901   607456   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001318391 NM_032830
RefSeq genomic (Entrez)NC_000016 NC_018927 NG_008278 NT_010498 NW_003315946 NW_004929402
Consensus coding sequences : CCDS (NCBI)UTP4
Cluster EST : UnigeneHs.461113 [ NCBI ]
CGAP (NCI)Hs.461113
Alternative Splicing GalleryENSG00000141076
Gene ExpressionUTP4 [ NCBI-GEO ]   UTP4 [ EBI - ARRAY_EXPRESS ]   UTP4 [ SEEK ]   UTP4 [ MEM ]
Gene Expression Viewer (FireBrowse)UTP4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)84916
GTEX Portal (Tissue expression)UTP4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UTP4
DMDM Disease mutations84916
Blocks (Seattle)UTP4
Human Protein AtlasENSG00000141076
HPRD08468
IPIIPI00239815   IPI00399195   IPI00399197   
Protein Interaction databases
FunCoupENSG00000141076
BioGRIDUTP4
STRING (EMBL)UTP4
ZODIACUTP4
Ontologies - Pathways
Huge Navigator UTP4 [HugePedia]
snp3D : Map Gene to Disease84916
BioCentury BCIQUTP4
ClinGenUTP4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84916
Chemical/Pharm GKB GenePA26520
Clinical trialUTP4
Miscellaneous
canSAR (ICR)UTP4 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUTP4
EVEXUTP4
GoPubMedUTP4
iHOPUTP4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:51:08 CET 2017

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