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UTS2B (urotensin 2B)

Identity

Alias_namesUTS2D
urotensin 2 domain containing
Alias_symbol (synonym)URP
U2B
Other alias
HGNC (Hugo) UTS2B
LocusID (NCBI) 257313
Atlas_Id 75576
Location 3q28  [Link to chromosome band 3q28]
Location_base_pair Starts at 191267155 and ends at 191330536 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MAP3K13 (3q27.2) / UTS2B (3q28)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UTS2B   30894
Cards
Entrez_Gene (NCBI)UTS2B  257313  urotensin 2B
AliasesU2B; URP; UTS2D
GeneCards (Weizmann)UTS2B
Ensembl hg19 (Hinxton)ENSG00000188958 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188958 [Gene_View]  chr3:191267155-191330536 [Contig_View]  UTS2B [Vega]
ICGC DataPortalENSG00000188958
TCGA cBioPortalUTS2B
AceView (NCBI)UTS2B
Genatlas (Paris)UTS2B
WikiGenes257313
SOURCE (Princeton)UTS2B
Genetics Home Reference (NIH)UTS2B
Genomic and cartography
GoldenPath hg38 (UCSC)UTS2B  -     chr3:191267155-191330536 -  3q28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UTS2B  -     3q28   [Description]    (hg19-Feb_2009)
EnsemblUTS2B - 3q28 [CytoView hg19]  UTS2B - 3q28 [CytoView hg38]
Mapping of homologs : NCBIUTS2B [Mapview hg19]  UTS2B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB116021 AK090630 AY321313 BC112166 DB068521
RefSeq transcript (Entrez)NM_198152
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UTS2B
Cluster EST : UnigeneHs.518492 [ NCBI ]
CGAP (NCI)Hs.518492
Alternative Splicing GalleryENSG00000188958
Gene ExpressionUTS2B [ NCBI-GEO ]   UTS2B [ EBI - ARRAY_EXPRESS ]   UTS2B [ SEEK ]   UTS2B [ MEM ]
Gene Expression Viewer (FireBrowse)UTS2B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)257313
GTEX Portal (Tissue expression)UTS2B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ765I0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ765I0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ765I0
Splice isoforms : SwissVarQ765I0
PhosPhoSitePlusQ765I0
Domaine pattern : Prosite (Expaxy)UROTENSIN_II (PS00984)   
Domains : Interpro (EBI)Urotensin_II   
Domain families : Pfam (Sanger)Urotensin_II (PF02083)   
Domain families : Pfam (NCBI)pfam02083   
Conserved Domain (NCBI)UTS2B
DMDM Disease mutations257313
Blocks (Seattle)UTS2B
SuperfamilyQ765I0
Human Protein AtlasENSG00000188958
Peptide AtlasQ765I0
HPRD15630
IPIIPI00377048   IPI00925184   IPI00793865   IPI00926098   
Protein Interaction databases
DIP (DOE-UCLA)Q765I0
IntAct (EBI)Q765I0
FunCoupENSG00000188958
BioGRIDUTS2B
STRING (EMBL)UTS2B
ZODIACUTS2B
Ontologies - Pathways
QuickGOQ765I0
Ontology : AmiGOG-protein coupled receptor binding  hormone activity  extracellular region  regulation of blood pressure  regulation of blood vessel diameter  
Ontology : EGO-EBIG-protein coupled receptor binding  hormone activity  extracellular region  regulation of blood pressure  regulation of blood vessel diameter  
NDEx NetworkUTS2B
Atlas of Cancer Signalling NetworkUTS2B
Wikipedia pathwaysUTS2B
Orthology - Evolution
OrthoDB257313
GeneTree (enSembl)ENSG00000188958
Phylogenetic Trees/Animal Genes : TreeFamUTS2B
HOVERGENQ765I0
HOGENOMQ765I0
Homologs : HomoloGeneUTS2B
Homology/Alignments : Family Browser (UCSC)UTS2B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUTS2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UTS2B
dbVarUTS2B
ClinVarUTS2B
1000_GenomesUTS2B 
Exome Variant ServerUTS2B
ExAC (Exome Aggregation Consortium)UTS2B (select the gene name)
Genetic variants : HAPMAP257313
Genomic Variants (DGV)UTS2B [DGVbeta]
DECIPHERUTS2B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUTS2B 
Mutations
ICGC Data PortalUTS2B 
TCGA Data PortalUTS2B 
Broad Tumor PortalUTS2B
OASIS PortalUTS2B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDUTS2B
BioMutasearch UTS2B
DgiDB (Drug Gene Interaction Database)UTS2B
DoCM (Curated mutations)UTS2B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UTS2B (select a term)
intoGenUTS2B
Cancer3DUTS2B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenUTS2B
Genetic Testing Registry UTS2B
NextProtQ765I0 [Medical]
TSGene257313
GENETestsUTS2B
Target ValidationUTS2B
Huge Navigator UTS2B [HugePedia]
snp3D : Map Gene to Disease257313
BioCentury BCIQUTS2B
ClinGenUTS2B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD257313
Chemical/Pharm GKB GenePA142670632
Clinical trialUTS2B
Miscellaneous
canSAR (ICR)UTS2B (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUTS2B
EVEXUTS2B
GoPubMedUTS2B
iHOPUTS2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:48:30 CEST 2017

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