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UXT (ubiquitously expressed prefoldin like chaperone)

Identity

Alias_namesubiquitously-expressed transcript
ubiquitously-expressed, prefoldin-like chaperone
Alias_symbol (synonym)ART-27
STAP1
Other alias
HGNC (Hugo) UXT
LocusID (NCBI) 8409
Atlas_Id 42779
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 47651792 and ends at 47659180 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CCDC117 (22q12.1) / UXT (Xp11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UXT   12641
Cards
Entrez_Gene (NCBI)UXT  8409  ubiquitously expressed prefoldin like chaperone
AliasesART-27; STAP1
GeneCards (Weizmann)UXT
Ensembl hg19 (Hinxton)ENSG00000126756 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000126756 [Gene_View]  chrX:47651792-47659180 [Contig_View]  UXT [Vega]
ICGC DataPortalENSG00000126756
TCGA cBioPortalUXT
AceView (NCBI)UXT
Genatlas (Paris)UXT
WikiGenes8409
SOURCE (Princeton)UXT
Genetics Home Reference (NIH)UXT
Genomic and cartography
GoldenPath hg38 (UCSC)UXT  -     chrX:47651792-47659180 -  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UXT  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblUXT - Xp11.23 [CytoView hg19]  UXT - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIUXT [Mapview hg19]  UXT [Mapview hg38]
OMIM300234   
Gene and transcription
Genbank (Entrez)AF083241 AF083242 AF092737 AK223320 AK312072
RefSeq transcript (Entrez)NM_004182 NM_153477
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UXT
Cluster EST : UnigeneHs.735566 [ NCBI ]
CGAP (NCI)Hs.735566
Alternative Splicing GalleryENSG00000126756
Gene ExpressionUXT [ NCBI-GEO ]   UXT [ EBI - ARRAY_EXPRESS ]   UXT [ SEEK ]   UXT [ MEM ]
Gene Expression Viewer (FireBrowse)UXT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8409
GTEX Portal (Tissue expression)UXT
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBK9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UBK9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UBK9
Splice isoforms : SwissVarQ9UBK9
PhosPhoSitePlusQ9UBK9
Domains : Interpro (EBI)Prefoldin    Prefoldin_subunit_alpha    UXT   
Domain families : Pfam (Sanger)Prefoldin (PF02996)   
Domain families : Pfam (NCBI)pfam02996   
Conserved Domain (NCBI)UXT
DMDM Disease mutations8409
Blocks (Seattle)UXT
SuperfamilyQ9UBK9
Human Protein AtlasENSG00000126756
Peptide AtlasQ9UBK9
HPRD02209
IPIIPI00002646   IPI00170862   IPI00553080   
Protein Interaction databases
DIP (DOE-UCLA)Q9UBK9
IntAct (EBI)Q9UBK9
FunCoupENSG00000126756
BioGRIDUXT
STRING (EMBL)UXT
ZODIACUXT
Ontologies - Pathways
QuickGOQ9UBK9
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  microtubule cytoskeleton organization  gamma-tubulin complex  RNA polymerase II transcription corepressor activity  chromatin binding  protein binding  nucleus  cytoplasm  centrosome  cytoskeleton  transcription, DNA-templated  centrosome cycle  microtubule binding  mitochondrion transport along microtubule  beta-tubulin binding  actin filament binding  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  microtubule cytoskeleton organization  gamma-tubulin complex  RNA polymerase II transcription corepressor activity  chromatin binding  protein binding  nucleus  cytoplasm  centrosome  cytoskeleton  transcription, DNA-templated  centrosome cycle  microtubule binding  mitochondrion transport along microtubule  beta-tubulin binding  actin filament binding  
NDEx NetworkUXT
Atlas of Cancer Signalling NetworkUXT
Wikipedia pathwaysUXT
Orthology - Evolution
OrthoDB8409
GeneTree (enSembl)ENSG00000126756
Phylogenetic Trees/Animal Genes : TreeFamUXT
HOVERGENQ9UBK9
HOGENOMQ9UBK9
Homologs : HomoloGeneUXT
Homology/Alignments : Family Browser (UCSC)UXT
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUXT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UXT
dbVarUXT
ClinVarUXT
1000_GenomesUXT 
Exome Variant ServerUXT
ExAC (Exome Aggregation Consortium)UXT (select the gene name)
Genetic variants : HAPMAP8409
Genomic Variants (DGV)UXT [DGVbeta]
DECIPHERUXT [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUXT 
Mutations
ICGC Data PortalUXT 
TCGA Data PortalUXT 
Broad Tumor PortalUXT
OASIS PortalUXT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUXT  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDUXT
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch UXT
DgiDB (Drug Gene Interaction Database)UXT
DoCM (Curated mutations)UXT (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UXT (select a term)
intoGenUXT
Cancer3DUXT(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300234   
Orphanet
MedgenUXT
Genetic Testing Registry UXT
NextProtQ9UBK9 [Medical]
TSGene8409
GENETestsUXT
Huge Navigator UXT [HugePedia]
snp3D : Map Gene to Disease8409
BioCentury BCIQUXT
ClinGenUXT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8409
Chemical/Pharm GKB GenePA37265
Clinical trialUXT
Miscellaneous
canSAR (ICR)UXT (select the gene name)
Probes
Litterature
PubMed45 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUXT
EVEXUXT
GoPubMedUXT
iHOPUXT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Fri May 19 12:43:41 CEST 2017

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