Atlas of Genetics and Cytogenetics in Oncology and Haematology


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VASH1-AS1 (VASH1 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) VASH1-AS1
LocusID (NCBI) 100506603
Atlas_Id 78993
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 76781733 and ends at 76786724 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)VASH1-AS1   53215
Cards
Entrez_Gene (NCBI)VASH1-AS1  100506603  VASH1 antisense RNA 1
Aliases
GeneCards (Weizmann)VASH1-AS1
Ensembl hg19 (Hinxton)ENSG00000258301 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000258301 [Gene_View]  chr14:76781733-76786724 [Contig_View]  VASH1-AS1 [Vega]
ICGC DataPortalENSG00000258301
TCGA cBioPortalVASH1-AS1
AceView (NCBI)VASH1-AS1
Genatlas (Paris)VASH1-AS1
WikiGenes100506603
SOURCE (Princeton)VASH1-AS1
Genetics Home Reference (NIH)VASH1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)VASH1-AS1  -     chr14:76781733-76786724 -  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VASH1-AS1  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblVASH1-AS1 - 14q24.3 [CytoView hg19]  VASH1-AS1 - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBIVASH1-AS1 [Mapview hg19]  VASH1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125727 BI907467 CB047699 DA369488
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)VASH1-AS1
Cluster EST : UnigeneHs.673984 [ NCBI ]
CGAP (NCI)Hs.673984
Alternative Splicing GalleryENSG00000258301
Gene ExpressionVASH1-AS1 [ NCBI-GEO ]   VASH1-AS1 [ EBI - ARRAY_EXPRESS ]   VASH1-AS1 [ SEEK ]   VASH1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)VASH1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506603
GTEX Portal (Tissue expression)VASH1-AS1
Human Protein AtlasENSG00000258301-VASH1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)VASH1-AS1
DMDM Disease mutations100506603
Blocks (Seattle)VASH1-AS1
Human Protein Atlas [tissue]ENSG00000258301-VASH1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000258301
BioGRIDVASH1-AS1
STRING (EMBL)VASH1-AS1
ZODIACVASH1-AS1
Ontologies - Pathways
Huge Navigator VASH1-AS1 [HugePedia]
snp3D : Map Gene to Disease100506603
BioCentury BCIQVASH1-AS1
ClinGenVASH1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506603
Clinical trialVASH1-AS1
Miscellaneous
canSAR (ICR)VASH1-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineVASH1-AS1
EVEXVASH1-AS1
GoPubMedVASH1-AS1
iHOPVASH1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:30:50 CET 2017

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