Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

VAV3-AS1 (VAV3 antisense RNA 1)

Identity

Alias_namesVAV3 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) VAV3-AS1
LocusID (NCBI) 100873946
Atlas_Id 75586
Location 1p13.3  [Link to chromosome band 1p13]
Location_base_pair Starts at 107964443 and ends at 107994607 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)VAV3-AS1   40608
Cards
Entrez_Gene (NCBI)VAV3-AS1  100873946  VAV3 antisense RNA 1
Aliases
GeneCards (Weizmann)VAV3-AS1
Ensembl hg19 (Hinxton)ENSG00000230489 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230489 [Gene_View]  chr1:107964443-107994607 [Contig_View]  VAV3-AS1 [Vega]
ICGC DataPortalENSG00000230489
TCGA cBioPortalVAV3-AS1
AceView (NCBI)VAV3-AS1
Genatlas (Paris)VAV3-AS1
WikiGenes100873946
SOURCE (Princeton)VAV3-AS1
Genetics Home Reference (NIH)VAV3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)VAV3-AS1  -     chr1:107964443-107994607 +  1p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VAV3-AS1  -     1p13.3   [Description]    (hg19-Feb_2009)
EnsemblVAV3-AS1 - 1p13.3 [CytoView hg19]  VAV3-AS1 - 1p13.3 [CytoView hg38]
Mapping of homologs : NCBIVAV3-AS1 [Mapview hg19]  VAV3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG193383 CR744964
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)VAV3-AS1
Cluster EST : UnigeneHs.568676 [ NCBI ]
CGAP (NCI)Hs.568676
Alternative Splicing GalleryENSG00000230489
Gene ExpressionVAV3-AS1 [ NCBI-GEO ]   VAV3-AS1 [ EBI - ARRAY_EXPRESS ]   VAV3-AS1 [ SEEK ]   VAV3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)VAV3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100873946
GTEX Portal (Tissue expression)VAV3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)VAV3-AS1
DMDM Disease mutations100873946
Blocks (Seattle)VAV3-AS1
Human Protein AtlasENSG00000230489
Protein Interaction databases
FunCoupENSG00000230489
BioGRIDVAV3-AS1
STRING (EMBL)VAV3-AS1
ZODIACVAV3-AS1
Ontologies - Pathways
Huge Navigator VAV3-AS1 [HugePedia]
snp3D : Map Gene to Disease100873946
BioCentury BCIQVAV3-AS1
ClinGenVAV3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100873946
Clinical trialVAV3-AS1
Miscellaneous
canSAR (ICR)VAV3-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineVAV3-AS1
EVEXVAV3-AS1
GoPubMedVAV3-AS1
iHOPVAV3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:01:06 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.