VAX2 (ventral anterior homeobox 2)

2017-08-01 Affiliation

Identity

HGNC

VAX2

LOCATION

2p13.3

LOCUSID

25806

ALIAS

DRES93

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 25806
MIM: 604295
HGNC: 12661
Ensembl: ENSG00000116035

Variants:

dbSNP: 25806
ClinVar: 25806
TCGA: ENSG00000116035
COSMIC: VAX2

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000116035	ENST00000234392	Q9UIW0
ENSG00000116035	ENST00000234392	F1T0K5
ENSG00000116035	ENST00000432367	C9J5E3
ENSG00000116035	ENST00000646783	A0A2R8Y6H5

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

References

Pubmed ID	Year	Title	Citations
19913121	2009	Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.	85
16953426	2006	Analysis of candidate genes on chromosome 2 in oral cleft case-parent trios from three populations.	16
20628086	2010	Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.	11
26929985	2016	Quantitative genome-wide methylation analysis of high-grade non-muscle invasive bladder cancer.	11
23322567	2013	Identification of a candidate gene for astigmatism.	10
29947570	2018	Identification and characterization of the VAX2 p.Leu139Arg variant: possible involvement of VAX2 in cone dystrophy.	1

Citation

Dessen P

VAX2 (ventral anterior homeobox 2)

Atlas Genet Cytogenet Oncol Haematol. 2017-08-01

Online version: http://atlasgeneticsoncology.org/gene/56914/vax2