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VCAN-AS1 (VCAN antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) VCAN-AS1
LocusID (NCBI) 105379054
Atlas_Id 78775
Location 5q14.3  [Link to chromosome band 5q14]
Location_base_pair Starts at 82827171 and ends at 82858133 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)VCAN-AS1   40163
Cards
Entrez_Gene (NCBI)VCAN-AS1  105379054  VCAN antisense RNA 1
Aliases
GeneCards (Weizmann)VCAN-AS1
Ensembl hg19 (Hinxton) [Gene_View]  chr5:82827171-82858133 [Contig_View]  VCAN-AS1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:82827171-82858133 [Contig_View]  VCAN-AS1 [Vega]
TCGA cBioPortalVCAN-AS1
AceView (NCBI)VCAN-AS1
Genatlas (Paris)VCAN-AS1
WikiGenes105379054
SOURCE (Princeton)VCAN-AS1
Genetics Home Reference (NIH)VCAN-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)VCAN-AS1  -     chr5:82827171-82858133 -  5q14.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)VCAN-AS1  -     5q14.3   [Description]    (hg38-Dec_2013)
EnsemblVCAN-AS1 - 5q14.3 [CytoView hg19]  VCAN-AS1 - 5q14.3 [CytoView hg38]
Mapping of homologs : NCBIVCAN-AS1 [Mapview hg19]  VCAN-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI819270 CD359288 DB446569 HG498148
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)VCAN-AS1
Cluster EST : UnigeneHs.667562 [ NCBI ]
CGAP (NCI)Hs.667562
Gene ExpressionVCAN-AS1 [ NCBI-GEO ]   VCAN-AS1 [ EBI - ARRAY_EXPRESS ]   VCAN-AS1 [ SEEK ]   VCAN-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)VCAN-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105379054
GTEX Portal (Tissue expression)VCAN-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)VCAN-AS1
DMDM Disease mutations105379054
Blocks (Seattle)VCAN-AS1
Protein Interaction databases
BioGRIDVCAN-AS1
STRING (EMBL)VCAN-AS1
ZODIACVCAN-AS1
Ontologies - Pathways
Huge Navigator VCAN-AS1 [HugePedia]
snp3D : Map Gene to Disease105379054
BioCentury BCIQVCAN-AS1
ClinGenVCAN-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105379054
Clinical trialVCAN-AS1
Miscellaneous
canSAR (ICR)VCAN-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineVCAN-AS1
EVEXVCAN-AS1
GoPubMedVCAN-AS1
iHOPVCAN-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:51:10 CET 2017

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