VCP (valosin-containing protein)

Identity

Other names	IBMPFD
	MGC131997
	MGC148092
	MGC8560
	TERA
	p97
HGNC	VCP
Location	9p13-p12
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	VCP   12666
Entrez_Gene	VCP  7415  valosin-containing protein
	Cards
GeneCards	VCP
Ensembl	VCP [Search_View]   ENSG00000165280 [Gene_View]
Genatlas	VCP
GeneLynx	VCP
eGenome	VCP
euGene	7415
	Genomic and cartography
GoldenPath	VCP  -     chr9:35046065-35062739 -  9p13.3   [Description]    (hg18-March_2006)
Ensembl	VCP - 9p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	VCP
	Gene and transcription
Genbank	AF100752 [ ENTREZ ]
Genbank	AF313485 [ ENTREZ ]
Genbank	AF313486 [ ENTREZ ]
Genbank	AI343015 [ ENTREZ ]
Genbank	AK307735 [ ENTREZ ]
RefSeq	NM_007126 [ SRS ]    NM_007126 [ ENTREZ ]
RefSeq	AC_000052 [ SRS ]    AC_000052 [ ENTREZ ]
RefSeq	AC_000141 [ SRS ]    AC_000141 [ ENTREZ ]
RefSeq	NC_000009 [ SRS ]    NC_000009 [ ENTREZ ]
RefSeq	NG_007312 [ SRS ]    NG_007312 [ ENTREZ ]
RefSeq	NG_007887 [ SRS ]    NG_007887 [ ENTREZ ]
RefSeq	NT_008413 [ SRS ]    NT_008413 [ ENTREZ ]
RefSeq	NW_001839149 [ SRS ]    NW_001839149 [ ENTREZ ]
RefSeq	NW_924062 [ SRS ]    NW_924062 [ ENTREZ ]
AceView	VCP AceView - NCBI
Unigene	Hs.529782 [ SRS ]    Hs.529782 [ NCBI ]     HS529782 [ spliceNest ]
Fast-db	5774 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P55072 [ SRS]    P55072 [ EXPASY ]     P55072 [ INTERPRO ]     P55072 [ UNIPROT ]
Prosite	PS00674 AAA [ SRS ]    PS00674 AAA [ Expasy ]
Interpro	IPR003593 AAA+_ATPase_core [ SRS ]    IPR003593 AAA+_ATPase_core [ EBI ]
Interpro	IPR003959 AAA_ATPase_core [ SRS ]    IPR003959 AAA_ATPase_core [ EBI ]
Interpro	IPR003960 AAA_ATPase_CS [ SRS ]    IPR003960 AAA_ATPase_CS [ EBI ]
Interpro	IPR005938 AAA_CDC48 [ SRS ]    IPR005938 AAA_CDC48 [ EBI ]
Interpro	IPR009010 Asp_de-COase-like_fold [ SRS ]    IPR009010 Asp_de-COase-like_fold [ EBI ]
Interpro	IPR003338 ATPaseVAT_N [ SRS ]    IPR003338 ATPaseVAT_N [ EBI ]
CluSTr	P55072
Pfam	PF00004 AAA [ SRS ]    PF00004 AAA [ Sanger ]    pfam00004 [ NCBI-CDD ]
Pfam	PF02359 CDC48_N [ SRS ]    PF02359 CDC48_N [ Sanger ]    pfam02359 [ NCBI-CDD ]
Smart	SM00382 AAA [EMBL]
Blocks	P55072
HPRD	03013
	Protein Interaction databases
DIP	P55072
IntAct	P55072
	Polymorphism : SNP, mutations, diseases
OMIM	167320;601023    [ map ]
GENECLINICS	167320;601023
SNP	VCP [dbSNP-NCBI]
SNP	NM_007126 [SNP-NCI]
SNP	VCP [GeneSNPs - Utah]  VCP] [HGBASE - SRS]
HAPMAP	VCP [HAPMAP]
COSMIC	VCP [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	VCP
	General knowledge
Family Browser	VCP [UCSC Family Browser]
SOURCE	NM_007126
SMD	Hs.529782
SAGE	Hs.529782
GO	nucleotide binding [Amigo]  nucleotide binding
GO	protein binding [Amigo]  protein binding
GO	ATP binding [Amigo]  ATP binding
GO	ATP binding [Amigo]  ATP binding
GO	nucleus [Amigo]  nucleus
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	microsome [Amigo]  microsome
GO	cytosol [Amigo]  cytosol
GO	double-strand break repair [Amigo]  double-strand break repair
GO	transport [Amigo]  transport
GO	caspase activation [Amigo]  caspase activation
GO	lipid binding [Amigo]  lipid binding
GO	protein ubiquitination [Amigo]  protein ubiquitination
GO	hydrolase activity [Amigo]  hydrolase activity
GO	ATPase activity [Amigo]  ATPase activity
GO	nucleoside-triphosphatase activity [Amigo]  nucleoside-triphosphatase activity
GO	ER-associated protein catabolic process [Amigo]  ER-associated protein catabolic process
GO	endoplasmic reticulum unfolded protein response [Amigo]  endoplasmic reticulum unfolded protein response
GO	retrograde protein transport, ER to cytosol [Amigo]  retrograde protein transport, ER to cytosol
GO	regulation of apoptosis [Amigo]  regulation of apoptosis
GO	establishment of protein localization [Amigo]  establishment of protein localization
PubGene	VCP
TreeFam	VCP
CTD	7415 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	VCP Related clones (RZPD - Berlin)
	PubMed
PubMed	79 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Sep 29 18:28:40 2008