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VIM-AS1 (VIM antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) VIM-AS1
LocusID (NCBI) 100507347
Atlas_Id 75605
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 17214239 and ends at 17226898 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)VIM-AS1   44879
Cards
Entrez_Gene (NCBI)VIM-AS1  100507347  VIM antisense RNA 1
Aliases
GeneCards (Weizmann)VIM-AS1
Ensembl hg19 (Hinxton)ENSG00000229124 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229124 [Gene_View]  chr10:17214239-17226898 [Contig_View]  VIM-AS1 [Vega]
ICGC DataPortalENSG00000229124
TCGA cBioPortalVIM-AS1
AceView (NCBI)VIM-AS1
Genatlas (Paris)VIM-AS1
WikiGenes100507347
SOURCE (Princeton)VIM-AS1
Genetics Home Reference (NIH)VIM-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)VIM-AS1  -     chr10:17214239-17226898 -  10p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VIM-AS1  -     10p13   [Description]    (hg19-Feb_2009)
EnsemblVIM-AS1 - 10p13 [CytoView hg19]  VIM-AS1 - 10p13 [CytoView hg38]
Mapping of homologs : NCBIVIM-AS1 [Mapview hg19]  VIM-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC078172 BG492614 BG495699 BM923888 H08157
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)VIM-AS1
Cluster EST : UnigeneHs.740502 [ NCBI ]
CGAP (NCI)Hs.740502
Alternative Splicing GalleryENSG00000229124
Gene ExpressionVIM-AS1 [ NCBI-GEO ]   VIM-AS1 [ EBI - ARRAY_EXPRESS ]   VIM-AS1 [ SEEK ]   VIM-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)VIM-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507347
GTEX Portal (Tissue expression)VIM-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)VIM-AS1
DMDM Disease mutations100507347
Blocks (Seattle)VIM-AS1
Human Protein AtlasENSG00000229124
Protein Interaction databases
FunCoupENSG00000229124
BioGRIDVIM-AS1
STRING (EMBL)VIM-AS1
ZODIACVIM-AS1
Ontologies - Pathways
Huge Navigator VIM-AS1 [HugePedia]
snp3D : Map Gene to Disease100507347
BioCentury BCIQVIM-AS1
ClinGenVIM-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507347
Clinical trialVIM-AS1
Miscellaneous
canSAR (ICR)VIM-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineVIM-AS1
EVEXVIM-AS1
GoPubMedVIM-AS1
iHOPVIM-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:01:09 CEST 2017

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