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VLDLR-AS1 (VLDLR antisense RNA 1)

Identity

Alias (NCBI)linc-VLDLR
lincRNA-VLDLR
HGNC (Hugo) VLDLR-AS1
HGNC Alias symblincRNA-VLDLR
LocusID (NCBI) 401491
Atlas_Id 57970
Location 9p24.2  [Link to chromosome band 9p24]
Location_base_pair Starts at 2535655 and ends at 2622373 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)VLDLR-AS1   49621
Cards
Entrez_Gene (NCBI)VLDLR-AS1    VLDLR antisense RNA 1
Aliaseslinc-VLDLR; lincRNA-VLDLR
GeneCards (Weizmann)VLDLR-AS1
Ensembl hg19 (Hinxton)ENSG00000236404 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236404 [Gene_View]  ENSG00000236404 [Sequence]  chr9:2535655-2622373 [Contig_View]  VLDLR-AS1 [Vega]
ICGC DataPortalENSG00000236404
TCGA cBioPortalVLDLR-AS1
AceView (NCBI)VLDLR-AS1
Genatlas (Paris)VLDLR-AS1
SOURCE (Princeton)VLDLR-AS1
Genetics Home Reference (NIH)VLDLR-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)VLDLR-AS1  -     chr9:2535655-2622373 -  9p24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VLDLR-AS1  -     9p24.2   [Description]    (hg19-Feb_2009)
GoldenPathVLDLR-AS1 - 9p24.2 [CytoView hg19]  VLDLR-AS1 - 9p24.2 [CytoView hg38]
ImmunoBaseENSG00000236404
Genome Data Viewer NCBIVLDLR-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF424541 BC004474 BE086096 CR627004 DA119626
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)VLDLR-AS1
Gene ExpressionVLDLR-AS1 [ NCBI-GEO ]   VLDLR-AS1 [ EBI - ARRAY_EXPRESS ]   VLDLR-AS1 [ SEEK ]   VLDLR-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)VLDLR-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of VLDLR-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401491
GTEX Portal (Tissue expression)VLDLR-AS1
Human Protein AtlasENSG00000236404-VLDLR-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)VLDLR-AS1
Human Protein Atlas [tissue]ENSG00000236404-VLDLR-AS1 [tissue]
Protein Interaction databases
BioGRIDVLDLR-AS1
STRING (EMBL)VLDLR-AS1
ZODIACVLDLR-AS1
Ontologies - Pathways
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXVLDLR-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:38:02 CEST 2021

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