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VN1R3 (vomeronasal 1 receptor 3 (gene/pseudogene))

Identity

Alias_namesvomeronasal 1 receptor 3
vomeronasal 1 receptor 3 pseudogene
Alias_symbol (synonym)V1RL3
FKSG46
Other aliasV1RL3p
HGNC (Hugo) VN1R3
LocusID (NCBI) 317702
Atlas_Id 75617
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 31807585 and ends at 31808853 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)VN1R3   19867
Cards
Entrez_Gene (NCBI)VN1R3  317702  vomeronasal 1 receptor 3 (gene/pseudogene)
AliasesFKSG46; V1RL3; V1RL3p
GeneCards (Weizmann)VN1R3
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:31807585-31808853 [Contig_View]  VN1R3 [Vega]
TCGA cBioPortalVN1R3
AceView (NCBI)VN1R3
Genatlas (Paris)VN1R3
WikiGenes317702
SOURCE (Princeton)VN1R3
Genetics Home Reference (NIH)VN1R3
Genomic and cartography
GoldenPath hg38 (UCSC)VN1R3  -     chr16:31807585-31808853 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VN1R3  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblVN1R3 - 16p11.2 [CytoView hg19]  VN1R3 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIVN1R3 [Mapview hg19]  VN1R3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF336873 BC107073 BC107074
RefSeq transcript (Entrez)NM_174980
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)VN1R3
Cluster EST : UnigeneHs.257746 [ NCBI ]
CGAP (NCI)Hs.257746
Gene ExpressionVN1R3 [ NCBI-GEO ]   VN1R3 [ EBI - ARRAY_EXPRESS ]   VN1R3 [ SEEK ]   VN1R3 [ MEM ]
Gene Expression Viewer (FireBrowse)VN1R3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)317702
GTEX Portal (Tissue expression)VN1R3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXE9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXE9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXE9
Splice isoforms : SwissVarQ9BXE9
PhosPhoSitePlusQ9BXE9
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn_7TM    Vmron_rcpt_1   
Domain families : Pfam (Sanger)V1R (PF03402)   
Domain families : Pfam (NCBI)pfam03402   
Conserved Domain (NCBI)VN1R3
DMDM Disease mutations317702
Blocks (Seattle)VN1R3
SuperfamilyQ9BXE9
Peptide AtlasQ9BXE9
IPIIPI00000035   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXE9
IntAct (EBI)Q9BXE9
BioGRIDVN1R3
STRING (EMBL)VN1R3
ZODIACVN1R3
Ontologies - Pathways
QuickGOQ9BXE9
Ontology : AmiGOplasma membrane  G-protein coupled receptor signaling pathway  sensory perception of chemical stimulus  integral component of membrane  pheromone receptor activity  response to pheromone  
Ontology : EGO-EBIplasma membrane  G-protein coupled receptor signaling pathway  sensory perception of chemical stimulus  integral component of membrane  pheromone receptor activity  response to pheromone  
NDEx NetworkVN1R3
Atlas of Cancer Signalling NetworkVN1R3
Wikipedia pathwaysVN1R3
Orthology - Evolution
OrthoDB317702
Phylogenetic Trees/Animal Genes : TreeFamVN1R3
HOVERGENQ9BXE9
HOGENOMQ9BXE9
Homologs : HomoloGeneVN1R3
Homology/Alignments : Family Browser (UCSC)VN1R3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerVN1R3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)VN1R3
dbVarVN1R3
ClinVarVN1R3
1000_GenomesVN1R3 
Exome Variant ServerVN1R3
ExAC (Exome Aggregation Consortium)VN1R3 (select the gene name)
Genetic variants : HAPMAP317702
Genomic Variants (DGV)VN1R3 [DGVbeta]
DECIPHERVN1R3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisVN1R3 
Mutations
ICGC Data PortalVN1R3 
TCGA Data PortalVN1R3 
Broad Tumor PortalVN1R3
OASIS PortalVN1R3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDVN1R3
BioMutasearch VN1R3
DgiDB (Drug Gene Interaction Database)VN1R3
DoCM (Curated mutations)VN1R3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)VN1R3 (select a term)
intoGenVN1R3
Cancer3DVN1R3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenVN1R3
Genetic Testing Registry VN1R3
NextProtQ9BXE9 [Medical]
TSGene317702
GENETestsVN1R3
Target ValidationVN1R3
Huge Navigator VN1R3 [HugePedia]
snp3D : Map Gene to Disease317702
BioCentury BCIQVN1R3
ClinGenVN1R3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD317702
Chemical/Pharm GKB GenePA142670620
Clinical trialVN1R3
Miscellaneous
canSAR (ICR)VN1R3 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineVN1R3
EVEXVN1R3
GoPubMedVN1R3
iHOPVN1R3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:48:37 CEST 2017

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