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VN1R5 (vomeronasal 1 receptor 5 (gene/pseudogene))

Identity

Alias_namesvomeronasal 1 receptor 5
Alias_symbol (synonym)V1RL5
Other alias
HGNC (Hugo) VN1R5
LocusID (NCBI) 317705
Atlas_Id 75619
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 247256072 and ends at 247257145 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)VN1R5   19870
Cards
Entrez_Gene (NCBI)VN1R5  317705  vomeronasal 1 receptor 5 (gene/pseudogene)
AliasesV1RL5
GeneCards (Weizmann)VN1R5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:247256072-247257145 [Contig_View]  VN1R5 [Vega]
TCGA cBioPortalVN1R5
AceView (NCBI)VN1R5
Genatlas (Paris)VN1R5
WikiGenes317705
SOURCE (Princeton)VN1R5
Genetics Home Reference (NIH)VN1R5
Genomic and cartography
GoldenPath hg38 (UCSC)VN1R5  -     chr1:247256072-247257145 +  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VN1R5  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblVN1R5 - 1q44 [CytoView hg19]  VN1R5 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIVN1R5 [Mapview hg19]  VN1R5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC126341 BC126367
RefSeq transcript (Entrez)NM_173858
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)VN1R5
Cluster EST : UnigeneHs.553686 [ NCBI ]
CGAP (NCI)Hs.553686
Gene ExpressionVN1R5 [ NCBI-GEO ]   VN1R5 [ EBI - ARRAY_EXPRESS ]   VN1R5 [ SEEK ]   VN1R5 [ MEM ]
Gene Expression Viewer (FireBrowse)VN1R5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)317705
GTEX Portal (Tissue expression)VN1R5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z5H4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z5H4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z5H4
Splice isoforms : SwissVarQ7Z5H4
PhosPhoSitePlusQ7Z5H4
Domains : Interpro (EBI)Vmron_rcpt_1   
Domain families : Pfam (Sanger)V1R (PF03402)   
Domain families : Pfam (NCBI)pfam03402   
Conserved Domain (NCBI)VN1R5
DMDM Disease mutations317705
Blocks (Seattle)VN1R5
SuperfamilyQ7Z5H4
Peptide AtlasQ7Z5H4
HPRD18288
IPIIPI00168753   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z5H4
IntAct (EBI)Q7Z5H4
BioGRIDVN1R5
STRING (EMBL)VN1R5
ZODIACVN1R5
Ontologies - Pathways
QuickGOQ7Z5H4
Ontology : AmiGOplasma membrane  G-protein coupled receptor signaling pathway  sensory perception of chemical stimulus  integral component of membrane  pheromone receptor activity  response to pheromone  
Ontology : EGO-EBIplasma membrane  G-protein coupled receptor signaling pathway  sensory perception of chemical stimulus  integral component of membrane  pheromone receptor activity  response to pheromone  
NDEx NetworkVN1R5
Atlas of Cancer Signalling NetworkVN1R5
Wikipedia pathwaysVN1R5
Orthology - Evolution
OrthoDB317705
Phylogenetic Trees/Animal Genes : TreeFamVN1R5
HOVERGENQ7Z5H4
HOGENOMQ7Z5H4
Homologs : HomoloGeneVN1R5
Homology/Alignments : Family Browser (UCSC)VN1R5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerVN1R5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)VN1R5
dbVarVN1R5
ClinVarVN1R5
1000_GenomesVN1R5 
Exome Variant ServerVN1R5
ExAC (Exome Aggregation Consortium)VN1R5 (select the gene name)
Genetic variants : HAPMAP317705
Genomic Variants (DGV)VN1R5 [DGVbeta]
DECIPHERVN1R5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisVN1R5 
Mutations
ICGC Data PortalVN1R5 
TCGA Data PortalVN1R5 
Broad Tumor PortalVN1R5
OASIS PortalVN1R5 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDVN1R5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch VN1R5
DgiDB (Drug Gene Interaction Database)VN1R5
DoCM (Curated mutations)VN1R5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)VN1R5 (select a term)
intoGenVN1R5
Cancer3DVN1R5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenVN1R5
Genetic Testing Registry VN1R5
NextProtQ7Z5H4 [Medical]
TSGene317705
GENETestsVN1R5
Target ValidationVN1R5
Huge Navigator VN1R5 [HugePedia]
snp3D : Map Gene to Disease317705
BioCentury BCIQVN1R5
ClinGenVN1R5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD317705
Chemical/Pharm GKB GenePA134993066
Clinical trialVN1R5
Miscellaneous
canSAR (ICR)VN1R5 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineVN1R5
EVEXVN1R5
GoPubMedVN1R5
iHOPVN1R5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:48:37 CEST 2017

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