| Nomenclature |
HGNC (Hugo) | VPS26B 28119 |
| Cards |
Entrez_Gene (NCBI) | VPS26B VPS26, retromer complex component B |
Aliases | Pep8b |
GeneCards (Weizmann) | VPS26B |
Ensembl hg19 (Hinxton) | ENSG00000151502 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000151502 [Gene_View]  ENSG00000151502 [Sequence] chr11:134224605-134247792 [Contig_View] VPS26B [Vega] |
ICGC DataPortal | ENSG00000151502 |
TCGA cBioPortal | VPS26B |
AceView (NCBI) | VPS26B |
Genatlas (Paris) | VPS26B |
SOURCE (Princeton) | VPS26B |
Genetics Home Reference (NIH) | VPS26B |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | VPS26B - chr11:134224605-134247792 + 11q25 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | VPS26B - 11q25 [Description] (hg19-Feb_2009) |
GoldenPath | VPS26B - 11q25 [CytoView hg19] VPS26B - 11q25 [CytoView hg38] |
ImmunoBase | ENSG00000151502 |
genome Data Viewer NCBI | VPS26B [Mapview hg19] |
OMIM | 610027 |
| Gene and transcription |
Genbank (Entrez) | AF452718 AV735504 BC007799 BC009747 BC013255 |
RefSeq transcript (Entrez) | NM_052875 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | VPS26B |
Alternative Splicing Gallery | ENSG00000151502 |
Gene Expression | VPS26B [ NCBI-GEO ] VPS26B [ EBI - ARRAY_EXPRESS ]
VPS26B [ SEEK ] VPS26B [ MEM ] |
Gene Expression Viewer (FireBrowse) | VPS26B [ Firebrowse - Broad ] |
Genevisible | Expression of VPS26B in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 112936 |
GTEX Portal (Tissue expression) | VPS26B |
Human Protein Atlas | ENSG00000151502-VPS26B [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q4G0F5 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q4G0F5 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q4G0F5 |
Splice isoforms : SwissVar | Q4G0F5 |
PhosPhoSitePlus | Q4G0F5 |
Domains : Interpro (EBI) | Arrestin_C Vps26-related |
Domain families : Pfam (Sanger) | Vps26 (PF03643) |
Domain families : Pfam (NCBI) | pfam03643 |
Conserved Domain (NCBI) | VPS26B |
Blocks (Seattle) | VPS26B |
Superfamily | Q4G0F5 |
Human Protein Atlas [tissue] | ENSG00000151502-VPS26B [tissue] |
Peptide Atlas | Q4G0F5 |
HPRD | 14395 |
IPI | IPI00059264 IPI00981595 IPI00978355 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q4G0F5 |
IntAct (EBI) | Q4G0F5 |
BioGRID | VPS26B |
STRING (EMBL) | VPS26B |
ZODIAC | VPS26B |
| Ontologies - Pathways |
QuickGO | Q4G0F5 |
Ontology : AmiGO | protein binding endosome early endosome late endosome cytosol intracellular protein transport regulation of macroautophagy retromer complex retromer complex retromer, cargo-selective complex retrograde transport, endosome to Golgi retrograde transport, endosome to Golgi retrograde transport, endosome to Golgi phagocytic vesicle cellular response to interferon-gamma |
Ontology : EGO-EBI | protein binding endosome early endosome late endosome cytosol intracellular protein transport regulation of macroautophagy retromer complex retromer complex retromer, cargo-selective complex retrograde transport, endosome to Golgi retrograde transport, endosome to Golgi retrograde transport, endosome to Golgi phagocytic vesicle cellular response to interferon-gamma |
NDEx Network | VPS26B |
Atlas of Cancer Signalling Network | VPS26B |
Wikipedia pathways | VPS26B |
| Orthology - Evolution |
OrthoDB | 112936 |
GeneTree (enSembl) | ENSG00000151502 |
Phylogenetic Trees/Animal Genes : TreeFam | VPS26B |
HOGENOM | Q4G0F5 |
Homologs : HomoloGene | VPS26B |
Homology/Alignments : Family Browser (UCSC) | VPS26B |
| Gene fusions - Rearrangements |
Fusion : Quiver | VPS26B |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | VPS26B [hg38] |
dbVar | VPS26B |
ClinVar | VPS26B |
Monarch | VPS26B |
1000_Genomes | VPS26B |
Exome Variant Server | VPS26B |
GNOMAD Browser | ENSG00000151502 |
Varsome Browser | VPS26B |
Genomic Variants (DGV) | VPS26B [DGVbeta] |
DECIPHER | VPS26B [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | VPS26B |
| Mutations |
ICGC Data Portal | VPS26B |
TCGA Data Portal | VPS26B |
Broad Tumor Portal | VPS26B |
OASIS Portal | VPS26B [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | VPS26B [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | VPS26B |
Mutations and Diseases : HGMD | VPS26B |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search VPS26B |
DgiDB (Drug Gene Interaction Database) | VPS26B |
DoCM (Curated mutations) | VPS26B (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | VPS26B (select a term) |
intoGen | VPS26B |
Cancer3D | VPS26B(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
---|
OMIM | 610027 |
Orphanet | |
DisGeNET | VPS26B |
Medgen | VPS26B |
Genetic Testing Registry | VPS26B
|
NextProt | Q4G0F5 [Medical] |
GENETests | VPS26B |
Target Validation | VPS26B |
Huge Navigator |
VPS26B [HugePedia] |
ClinGen | VPS26B |
| Clinical trials, drugs, therapy |
---|
MyCancerGenome | VPS26B |
Protein Interactions : CTD | |
Pharm GKB Gene | PA128394747 |
Clinical trial | VPS26B |
| Miscellaneous |
---|
canSAR (ICR) | VPS26B (select the gene name) |
Harmonizome | VPS26B |
DataMed Index | VPS26B |
| Probes |
---|
| Litterature |
---|
PubMed | 18 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | VPS26B |
EVEX | VPS26B |
GoPubMed | VPS26B |