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VPS35L (VPS35 endosomal protein sorting factor like)


Alias (NCBI)C16orf62
HGNC (Hugo) VPS35L
LocusID (NCBI) 57020
Atlas_Id 80534
Location 16p12.3  [Link to chromosome band 16p12]
Location_base_pair Starts at 19555703 and ends at 19701163 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)VPS35L   24641
Entrez_Gene (NCBI)VPS35L    VPS35 endosomal protein sorting factor like
AliasesC16orf62; EC97; RTSC3
GeneCards (Weizmann)VPS35L
Ensembl hg19 (Hinxton)ENSG00000103544 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103544 [Gene_View]  ENSG00000103544 [Sequence]  chr16:19555703-19701163 [Contig_View]  VPS35L [Vega]
ICGC DataPortalENSG00000103544
TCGA cBioPortalVPS35L
AceView (NCBI)VPS35L
Genatlas (Paris)VPS35L
SOURCE (Princeton)VPS35L
Genetics Home Reference (NIH)VPS35L
Genomic and cartography
GoldenPath hg38 (UCSC)VPS35L  -     chr16:19555703-19701163 +  16p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VPS35L  -     16p12.3   [Description]    (hg19-Feb_2009)
GoldenPathVPS35L - 16p12.3 [CytoView hg19]  VPS35L - 16p12.3 [CytoView hg38]
Genome Data Viewer NCBIVPS35L [Mapview hg19]  
OMIM618981   619135   
Gene and transcription
Genbank (Entrez)AF461052 AK024693 AK095078 AK290286 AK294885
RefSeq transcript (Entrez)NM_001300743 NM_001365293 NM_001365294 NM_001365295 NM_020314
Consensus coding sequences : CCDS (NCBI)VPS35L
Gene ExpressionVPS35L [ NCBI-GEO ]   VPS35L [ EBI - ARRAY_EXPRESS ]   VPS35L [ SEEK ]   VPS35L [ MEM ]
Gene Expression Viewer (FireBrowse)VPS35L [ Firebrowse - Broad ]
GenevisibleExpression of VPS35L in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57020
GTEX Portal (Tissue expression)VPS35L
Human Protein AtlasENSG00000103544-VPS35L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)VPS35L
Human Protein Atlas [tissue]ENSG00000103544-VPS35L [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:28:13 CEST 2021

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