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VPS35L (VPS35 endosomal protein sorting factor like)

Identity

Alias (NCBI)C16orf62
EC97
RTSC3
HGNC (Hugo) VPS35L
LocusID (NCBI) 57020
Atlas_Id 80534
Location 16p12.3  [Link to chromosome band 16p12]
Location_base_pair Starts at 19555703 and ends at 19701163 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)VPS35L   24641
Cards
Entrez_Gene (NCBI)VPS35L    VPS35 endosomal protein sorting factor like
AliasesC16orf62; EC97; RTSC3
GeneCards (Weizmann)VPS35L
Ensembl hg19 (Hinxton)ENSG00000103544 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103544 [Gene_View]  ENSG00000103544 [Sequence]  chr16:19555703-19701163 [Contig_View]  VPS35L [Vega]
ICGC DataPortalENSG00000103544
TCGA cBioPortalVPS35L
AceView (NCBI)VPS35L
Genatlas (Paris)VPS35L
SOURCE (Princeton)VPS35L
Genetics Home Reference (NIH)VPS35L
Genomic and cartography
GoldenPath hg38 (UCSC)VPS35L  -     chr16:19555703-19701163 +  16p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VPS35L  -     16p12.3   [Description]    (hg19-Feb_2009)
GoldenPathVPS35L - 16p12.3 [CytoView hg19]  VPS35L - 16p12.3 [CytoView hg38]
ImmunoBaseENSG00000103544
Genome Data Viewer NCBIVPS35L [Mapview hg19]  
OMIM618981   619135   
Gene and transcription
Genbank (Entrez)AF461052 AK024693 AK095078 AK290286 AK294885
RefSeq transcript (Entrez)NM_001300743 NM_001365293 NM_001365294 NM_001365295 NM_020314
Consensus coding sequences : CCDS (NCBI)VPS35L
Gene ExpressionVPS35L [ NCBI-GEO ]   VPS35L [ EBI - ARRAY_EXPRESS ]   VPS35L [ SEEK ]   VPS35L [ MEM ]
Gene Expression Viewer (FireBrowse)VPS35L [ Firebrowse - Broad ]
GenevisibleExpression of VPS35L in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57020
GTEX Portal (Tissue expression)VPS35L
Human Protein AtlasENSG00000103544-VPS35L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)VPS35L
Human Protein Atlas [tissue]ENSG00000103544-VPS35L [tissue]
Protein Interaction databases
BioGRIDVPS35L
STRING (EMBL)VPS35L
ZODIACVPS35L
Ontologies - Pathways
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXVPS35L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:28:13 CEST 2021

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