VPS50 (VPS50 subunit of EARP/GARPII complex)

2015-09-01  

Identity

HGNC
LOCATION
7q21.2
LOCUSID
ALIAS
CCDC132,VPS54L
FUSION GENES

Other Information

Locus ID:

NCBI: 55610
MIM: 616465
HGNC: 25956
Ensembl: ENSG00000004766

Variants:

dbSNP: 55610
ClinVar: 55610
TCGA: ENSG00000004766
COSMIC: VPS50

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000004766ENST00000251739Q96JG6
ENSG00000004766ENST00000305866Q96JG6
ENSG00000004766ENST00000436177F2Z3F0
ENSG00000004766ENST00000438395F8WDT1
ENSG00000004766ENST00000441602F2Z3F0
ENSG00000004766ENST00000443443H7BZP1
ENSG00000004766ENST00000458530C9JA29
ENSG00000004766ENST00000458707H0Y7Q2
ENSG00000004766ENST00000544910Q96JG6
ENSG00000004766ENST00000649152A0A3B3IRQ5

Expression (GTEx)

0
5
10
15
20

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
199131212009Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.85
206280862010Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.11

Citation

Dessen P

VPS50 (VPS50 subunit of EARP/GARPII complex)

Atlas Genet Cytogenet Oncol Haematol. 2015-09-01

Online version: http://atlasgeneticsoncology.org/gene/77794/vps50