VPS53 (vacuolar protein sorting 53 homolog (S. cerevisiae))

Identity

Other names	FLJ10979
	HCCS1
	MGC39512
	hVps53L
	pp13624
HGNC	VPS53
Location	17p13.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	VPS53   25608
Entrez_Gene	VPS53  55275  vacuolar protein sorting 53 homolog (S. cerevisiae)
	Cards
GeneCards	VPS53
Ensembl	VPS53 [Search_View]   ENSG00000141252 [Gene_View]
Genatlas	VPS53
GeneLynx	VPS53
eGenome	VPS53
euGene	55275
	Genomic and cartography
GoldenPath	VPS53  -  17p13.3   chr17:361480-564846 -  17p13.3   [Description]    (hg18-March_2006)
Ensembl	VPS53 - 17p13.3 [CytoView]
NCBI	Mapview
HomoloGene	VPS53
	Gene and transcription
Genbank	AF246287 [ ENTREZ ]
Genbank	AF318335 [ ENTREZ ]
Genbank	AK001841 [ ENTREZ ]
Genbank	AK091388 [ ENTREZ ]
Genbank	AK092532 [ ENTREZ ]
RefSeq	NM_001128159 [ SRS ]    NM_001128159 [ ENTREZ ]
RefSeq	NM_018289 [ SRS ]    NM_018289 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
AceView	VPS53 AceView - NCBI
Unigene	Hs.558076 [ SRS ]    Hs.558076 [ NCBI ]     HS558076 [ spliceNest ]
Fast-db	323 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q5VIR6 [ SRS]    Q5VIR6 [ EXPASY ]     Q5VIR6 [ INTERPRO ]     Q5VIR6 [ UNIPROT ]
Interpro	IPR007234 Vps53_N [ SRS ]    IPR007234 Vps53_N [ EBI ]
CluSTr	Q5VIR6
Pfam	PF04100 Vps53_N [ SRS ]    PF04100 Vps53_N [ Sanger ]    pfam04100 [ NCBI-CDD ]
Blocks	Q5VIR6
HPRD	07720
	Protein Interaction databases
DIP	Q5VIR6
IntAct	Q5VIR6
	Polymorphism : SNP, mutations, diseases
SNP	VPS53 [dbSNP-NCBI]
SNP	NM_001128159 [SNP-NCI]
SNP	NM_018289 [SNP-NCI]
SNP	VPS53 [GeneSNPs - Utah]  VPS53] [HGBASE - SRS]
HAPMAP	VPS53 [HAPMAP]
HGMD	VPS53
	General knowledge
Family Browser	VPS53 [UCSC Family Browser]
SOURCE	NM_001128159
SOURCE	NM_018289
SMD	Hs.558076
SAGE	Hs.558076
GO	endosome [Amigo]  endosome
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	endosome membrane [Amigo]  endosome membrane
GO	protein transport [Amigo]  protein transport
GO	membrane [Amigo]  membrane
PubGene	VPS53
TreeFam	VPS53
CTD	55275 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	VPS53 Related clones (RZPD - Berlin)
	PubMed
PubMed	11 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:38:01 2008