VTN (vitronectin)

Identity

Other names	V75
	VN
	VNT
HGNC	VTN
Location	17q11
Location_base_pair	Starts at 23718426 and ends at 23721500 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	VTN   12724
Entrez_Gene	VTN  7448  vitronectin
	Cards
GeneCards	VTN
Ensembl	VTN [Search_View]   ENSG00000109072 [Gene_View]
Genatlas	VTN
GeneLynx	VTN
eGenome	VTN
euGene	7448
	Genomic and cartography
GoldenPath	VTN  -  17q11   chr17:23718426-23721500 -  17q11.2   [Description]    (hg18-March_2006)
Ensembl	VTN - 17q11.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	VTN
	Gene and transcription
Genbank	AI352496 [ ENTREZ ]
Genbank	AK312968 [ ENTREZ ]
Genbank	BC005046 [ ENTREZ ]
Genbank	BG470977 [ ENTREZ ]
Genbank	BI758517 [ ENTREZ ]
RefSeq	NM_000638 [ SRS ]    NM_000638 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010799 [ SRS ]    NT_010799 [ ENTREZ ]
RefSeq	NW_001838430 [ SRS ]    NW_001838430 [ ENTREZ ]
RefSeq	NW_926750 [ SRS ]    NW_926750 [ ENTREZ ]
AceView	VTN AceView - NCBI
Unigene	Hs.2257 [ SRS ]    Hs.2257 [ NCBI ]     HS2257 [ spliceNest ]
Fast-db	6950 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P04004 [ SRS]    P04004 [ EXPASY ]     P04004 [ INTERPRO ]     P04004 [ UNIPROT ]
Prosite	PS00024 HEMOPEXIN [ SRS ]    PS00024 HEMOPEXIN [ Expasy ]
Prosite	PS00524 SMB_1 [ SRS ]    PS00524 SMB_1 [ Expasy ]
Prosite	PS50958 SMB_2 [ SRS ]    PS50958 SMB_2 [ Expasy ]
Interpro	IPR000585 Hemopexin [ SRS ]    IPR000585 Hemopexin [ EBI ]
Interpro	IPR001212 Somatomedin_B [ SRS ]    IPR001212 Somatomedin_B [ EBI ]
CluSTr	P04004
Pfam	PF00045 Hemopexin [ SRS ]    PF00045 Hemopexin [ Sanger ]    pfam00045 [ NCBI-CDD ]
Pfam	PF01033 Somatomedin_B [ SRS ]    PF01033 Somatomedin_B [ Sanger ]    pfam01033 [ NCBI-CDD ]
Smart	SM00120 HX [EMBL]
Smart	SM00201 SO [EMBL]
Blocks	P04004
PDB	1OC0 [ SRS ]    1OC0 [ PdbSum ],   1OC0 [ IMB ]   1OC0 [ RSDB ]
PDB	1S4G [ SRS ]    1S4G [ PdbSum ],   1S4G [ IMB ]   1S4G [ RSDB ]
PDB	1SSU [ SRS ]    1SSU [ PdbSum ],   1SSU [ IMB ]   1SSU [ RSDB ]
PDB	2JQ8 [ SRS ]    2JQ8 [ PdbSum ],   2JQ8 [ IMB ]   2JQ8 [ RSDB ]
PDB	3BT1 [ SRS ]    3BT1 [ PdbSum ],   3BT1 [ IMB ]   3BT1 [ RSDB ]
PDB	3BT2 [ SRS ]    3BT2 [ PdbSum ],   3BT2 [ IMB ]   3BT2 [ RSDB ]
HPRD	01902
	Protein Interaction databases
DIP	P04004
IntAct	P04004
	Polymorphism : SNP, mutations, diseases
OMIM	193190    [ map ]
GENECLINICS	193190
SNP	VTN [dbSNP-NCBI]
SNP	NM_000638 [SNP-NCI]
SNP	VTN [GeneSNPs - Utah]  VTN] [HGBASE - SRS]
HAPMAP	VTN [HAPMAP]
COSMIC	VTN [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	VTN
	General knowledge
Family Browser	VTN [UCSC Family Browser]
SOURCE	NM_000638
SMD	Hs.2257
SAGE	Hs.2257
GO	catalytic activity [Amigo]  catalytic activity
GO	protein binding [Amigo]  protein binding
GO	extracellular region [Amigo]  extracellular region
GO	proteinaceous extracellular matrix [Amigo]  proteinaceous extracellular matrix
GO	extracellular space [Amigo]  extracellular space
GO	immune response [Amigo]  immune response
GO	cell adhesion [Amigo]  cell adhesion
GO	cell-matrix adhesion [Amigo]  cell-matrix adhesion
GO	heparin binding [Amigo]  heparin binding
GO	metal ion binding [Amigo]  metal ion binding
KEGG	Cell Communication
KEGG	Focal adhesion
KEGG	ECM-receptor interaction
PubGene	VTN
TreeFam	VTN
CTD	7448 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	VTN Related clones (RZPD - Berlin)
	PubMed
PubMed	88 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Tue Oct 14 21:01:20 2008