Atlas of Genetics and Cytogenetics in Oncology and Haematology


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VTRNA1-2 (vault RNA 1-2)

Identity

Alias_namesVAULTRC2
vault RNA component 2
Alias_symbol (synonym)vtRNA1-2
hvg-2
HVG2
VR2
Other alias
HGNC (Hugo) VTRNA1-2
LocusID (NCBI) 56663
Atlas_Id 75659
Location 5q31.3  [Link to chromosome band 5q31]
Location_base_pair Starts at 140718926 and ends at 140719013 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)VTRNA1-2   12655
Cards
Entrez_Gene (NCBI)VTRNA1-2  56663  vault RNA 1-2
AliasesHVG2; VAULTRC2; VR2; hvg-2
GeneCards (Weizmann)VTRNA1-2
Ensembl hg19 (Hinxton)ENSG00000202111 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000202111 [Gene_View]  chr5:140718926-140719013 [Contig_View]  VTRNA1-2 [Vega]
ICGC DataPortalENSG00000202111
TCGA cBioPortalVTRNA1-2
AceView (NCBI)VTRNA1-2
Genatlas (Paris)VTRNA1-2
WikiGenes56663
SOURCE (Princeton)VTRNA1-2
Genetics Home Reference (NIH)VTRNA1-2
Genomic and cartography
GoldenPath hg38 (UCSC)VTRNA1-2  -     chr5:140718926-140719013 +  5q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VTRNA1-2  -     5q31.3   [Description]    (hg19-Feb_2009)
EnsemblVTRNA1-2 - 5q31.3 [CytoView hg19]  VTRNA1-2 - 5q31.3 [CytoView hg38]
Mapping of homologs : NCBIVTRNA1-2 [Mapview hg19]  VTRNA1-2 [Mapview hg38]
OMIM612696   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)VTRNA1-2
Alternative Splicing GalleryENSG00000202111
Gene ExpressionVTRNA1-2 [ NCBI-GEO ]   VTRNA1-2 [ EBI - ARRAY_EXPRESS ]   VTRNA1-2 [ SEEK ]   VTRNA1-2 [ MEM ]
Gene Expression Viewer (FireBrowse)VTRNA1-2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)56663
GTEX Portal (Tissue expression)VTRNA1-2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)VTRNA1-2
DMDM Disease mutations56663
Blocks (Seattle)VTRNA1-2
Human Protein AtlasENSG00000202111
Protein Interaction databases
FunCoupENSG00000202111
BioGRIDVTRNA1-2
STRING (EMBL)VTRNA1-2
ZODIACVTRNA1-2
Ontologies - Pathways
Huge Navigator VTRNA1-2 [HugePedia]
snp3D : Map Gene to Disease56663
BioCentury BCIQVTRNA1-2
ClinGenVTRNA1-2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56663
Chemical/Pharm GKB GenePA37278
Clinical trialVTRNA1-2
Miscellaneous
canSAR (ICR)VTRNA1-2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineVTRNA1-2
EVEXVTRNA1-2
GoPubMedVTRNA1-2
iHOPVTRNA1-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:48:45 CEST 2017

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