| Nomenclature |
HGNC (Hugo) | WASHC2C 23414 |
| Cards |
Entrez_Gene (NCBI) | WASHC2C WASH complex subunit 2C |
Aliases | FAM21A; FAM21C; VPEF |
GeneCards (Weizmann) | WASHC2C |
Ensembl hg19 (Hinxton) | ENSG00000172661 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000172661 [Gene_View]  ENSG00000172661 [Sequence] chr10:45727200-45792964 [Contig_View] WASHC2C [Vega] |
ICGC DataPortal | ENSG00000172661 |
TCGA cBioPortal | WASHC2C |
AceView (NCBI) | WASHC2C |
Genatlas (Paris) | WASHC2C |
SOURCE (Princeton) | WASHC2C |
Genetics Home Reference (NIH) | WASHC2C |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | WASHC2C - chr10:45727200-45792964 + 10q11.22 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | WASHC2C - 10q11.22 [Description] (hg19-Feb_2009) |
GoldenPath | WASHC2C - 10q11.22 [CytoView hg19] WASHC2C - 10q11.22 [CytoView hg38] |
ImmunoBase | ENSG00000172661 |
genome Data Viewer NCBI | WASHC2C [Mapview hg19] |
OMIM | 613631 |
| Gene and transcription |
Genbank (Entrez) | AB011164 AI023041 AI356516 AK001545 AK291430 |
RefSeq transcript (Entrez) | NM_001169106 NM_001169107 NM_001330074 NM_001367393 NM_001367394 NM_001367395 NM_001367396 NM_001367397 NM_001367398 NM_001367399 NM_001367400 NM_001367401 NM_001367402 NM_001367403 NM_001367404 NM_001367405 NM_001367406 NM_001367407 NM_001367408 NM_001367409 NM_001367410 NM_001367411 NM_001367412 NM_001367413 NM_001367414 NM_001367415 NM_001367416 NM_015262 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | WASHC2C |
Alternative Splicing Gallery | ENSG00000172661 |
Gene Expression | WASHC2C [ NCBI-GEO ] WASHC2C [ EBI - ARRAY_EXPRESS ]
WASHC2C [ SEEK ] WASHC2C [ MEM ] |
Gene Expression Viewer (FireBrowse) | WASHC2C [ Firebrowse - Broad ] |
Genevisible | Expression of WASHC2C in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 253725 |
GTEX Portal (Tissue expression) | WASHC2C |
Human Protein Atlas | ENSG00000172661-WASHC2C [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q9Y4E1 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q9Y4E1 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q9Y4E1 |
Splice isoforms : SwissVar | Q9Y4E1 |
PhosPhoSitePlus | Q9Y4E1 |
Domains : Interpro (EBI) | FAM21/CAPZIP |
Domain families : Pfam (Sanger) | CAP-ZIP_m (PF15255) |
Domain families : Pfam (NCBI) | pfam15255 |
Conserved Domain (NCBI) | WASHC2C |
Blocks (Seattle) | WASHC2C |
Superfamily | Q9Y4E1 |
Human Protein Atlas [tissue] | ENSG00000172661-WASHC2C [tissue] |
Peptide Atlas | Q9Y4E1 |
HPRD | 11094 |
IPI | IPI00514705 IPI00456853 IPI00556261 IPI00954966 IPI01011204 IPI01011198 IPI00954891 IPI00966110 IPI00871172 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q9Y4E1 |
IntAct (EBI) | Q9Y4E1 |
BioGRID | WASHC2C |
STRING (EMBL) | WASHC2C |
ZODIAC | WASHC2C |
| Ontologies - Pathways |
QuickGO | Q9Y4E1 |
Ontology : AmiGO | protein binding phosphatidylinositol-4,5-bisphosphate binding phosphatidylinositol-3,4,5-trisphosphate binding nucleolus endosome early endosome cytosol plasma membrane phosphatidylinositol-5-phosphate binding protein transport early endosome membrane phosphatidylinositol-3-phosphate binding protein localization to endosome retrograde transport, endosome to Golgi intracellular membrane-bounded organelle phosphatidylinositol-3,4-bisphosphate binding phosphatidylinositol-4-phosphate binding WASH complex phosphatidylinositol-3,5-bisphosphate binding regulation of substrate adhesion-dependent cell spreading retromer complex binding retromer complex binding retrograde transport, endosome to plasma membrane negative regulation of barbed-end actin filament capping |
Ontology : EGO-EBI | protein binding phosphatidylinositol-4,5-bisphosphate binding phosphatidylinositol-3,4,5-trisphosphate binding nucleolus endosome early endosome cytosol plasma membrane phosphatidylinositol-5-phosphate binding protein transport early endosome membrane phosphatidylinositol-3-phosphate binding protein localization to endosome retrograde transport, endosome to Golgi intracellular membrane-bounded organelle phosphatidylinositol-3,4-bisphosphate binding phosphatidylinositol-4-phosphate binding WASH complex phosphatidylinositol-3,5-bisphosphate binding regulation of substrate adhesion-dependent cell spreading retromer complex binding retromer complex binding retrograde transport, endosome to plasma membrane negative regulation of barbed-end actin filament capping |
NDEx Network | WASHC2C |
Atlas of Cancer Signalling Network | WASHC2C |
Wikipedia pathways | WASHC2C |
| Orthology - Evolution |
OrthoDB | 253725 |
GeneTree (enSembl) | ENSG00000172661 |
Phylogenetic Trees/Animal Genes : TreeFam | WASHC2C |
HOGENOM | Q9Y4E1 |
Homologs : HomoloGene | WASHC2C |
Homology/Alignments : Family Browser (UCSC) | WASHC2C |
| Gene fusions - Rearrangements |
Fusion : Quiver | WASHC2C |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | WASHC2C [hg38] |
dbVar | WASHC2C |
ClinVar | WASHC2C |
Monarch | WASHC2C |
1000_Genomes | WASHC2C |
Exome Variant Server | WASHC2C |
GNOMAD Browser | ENSG00000172661 |
Varsome Browser | WASHC2C |
Genomic Variants (DGV) | WASHC2C [DGVbeta] |
DECIPHER | WASHC2C [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | WASHC2C |
| Mutations |
ICGC Data Portal | WASHC2C |
TCGA Data Portal | WASHC2C |
Broad Tumor Portal | WASHC2C |
OASIS Portal | WASHC2C [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | WASHC2C [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | WASHC2C |
Mutations and Diseases : HGMD | WASHC2C |
BioMuta | search WASHC2C |
DgiDB (Drug Gene Interaction Database) | WASHC2C |
DoCM (Curated mutations) | WASHC2C (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | WASHC2C (select a term) |
intoGen | WASHC2C |
Cancer3D | WASHC2C(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
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OMIM | 613631 |
Orphanet | |
DisGeNET | WASHC2C |
Medgen | WASHC2C |
Genetic Testing Registry | WASHC2C
|
NextProt | Q9Y4E1 [Medical] |
GENETests | WASHC2C |
Target Validation | WASHC2C |
Huge Navigator |
WASHC2C [HugePedia] |
ClinGen | WASHC2C |
| Clinical trials, drugs, therapy |
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MyCancerGenome | WASHC2C |
Protein Interactions : CTD | |
Pharm GKB Gene | PA128394768 |
Clinical trial | WASHC2C |
| Miscellaneous |
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canSAR (ICR) | WASHC2C (select the gene name) |
Harmonizome | WASHC2C |
DataMed Index | WASHC2C |
| Probes |
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| Litterature |
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PubMed | 41 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | WASHC2C |
EVEX | WASHC2C |
GoPubMed | WASHC2C |